Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0193
         (590 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    32   0.003
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    25   0.36 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.6  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   3.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   3.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.5  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   5.9  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   5.9  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   7.8  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 32.3 bits (70), Expect = 0.003
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +3

Query: 363 KPFKQTSGKVVGAYFVEWGVYPR---KFPVDRVPVPNLTHLLYGFIPICGGEASMTV 524
           +P+  T  ++V  YF  W +Y     ++  + +PV   TH++Y FI +   + S+ V
Sbjct: 15  QPYDATPARIV-CYFSNWAIYRPGIGRYAQEDLPVDLCTHIVYSFIGVNDADWSVLV 70


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +3

Query: 378 TSGKVVGAYFVEWGVYP---RKFPVDRVPVPNLTHLLYGFI 491
           T+ KVV  Y+  W  Y     +F VD +     TH++Y F+
Sbjct: 22  TTDKVV-CYWGTWSTYRWGNGRFTVDHIDPYLCTHIIYSFV 61


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = +3

Query: 381 SGKVVGAYFVEWGVYPR---KFPVDRVPVPNLTHLLYGFI 491
           + KVV  Y   W  Y     KF V+ +     THL+Y F+
Sbjct: 19  TNKVV-CYHGIWSTYRLNNGKFTVEDIDPTLCTHLIYSFV 57


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 94  DAADVSVNWNVWTGDAA 144
           D +   V WN W G+A+
Sbjct: 104 DESKCDVFWNCWNGEAS 120


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 94  DAADVSVNWNVWTGDAA 144
           D +   V WN W G+A+
Sbjct: 104 DESKCDVFWNCWNGEAS 120


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 161 RTLDLSAASPVHTFQLTETSAASFLVTS 78
           RTLD  AAS +++F    T + SF  T+
Sbjct: 229 RTLDGMAASKLNSFHWHITDSHSFPFTA 256


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 509 LTTTNRNEAVEQMSQVRNRNAVHREL 432
           +   NRN+  + ++Q+RN     + L
Sbjct: 265 MNDANRNDCAKPLTQIRNIRGPRKRL 290


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 401 LLRRMGCVS*KVPCGP 448
           LLR++ C + + PC P
Sbjct: 45  LLRQLKCATGEAPCDP 60


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 509 LTTTNRNEAVEQMSQVRN 456
           +   NRN+  + ++Q+RN
Sbjct: 265 MNDANRNDCAKPLTQIRN 282


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 509 LTTTNRNEAVEQMSQVRN 456
           +   NRN+  + ++Q+RN
Sbjct: 265 MNDVNRNDCAKPLTQIRN 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,077
Number of Sequences: 336
Number of extensions: 2712
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)