Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0190
(679 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 169 4e-41
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 157 3e-37
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 128 2e-28
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 127 2e-28
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 122 8e-27
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 113 5e-24
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 112 7e-24
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 111 2e-23
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 109 5e-23
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 109 5e-23
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 109 6e-23
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 104 2e-21
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 103 5e-21
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 97 3e-19
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 95 1e-18
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 77 4e-13
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 75 2e-12
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 73 6e-12
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 69 1e-10
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 68 2e-10
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 63 5e-09
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 58 3e-07
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 55 1e-06
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 54 2e-06
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 50 4e-05
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 50 4e-05
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 46 0.001
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 44 0.005
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 42 0.018
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 40 0.074
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.22
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 37 0.39
UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,... 37 0.52
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 37 0.52
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 36 1.2
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.2
UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 2.8
UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe gri... 34 2.8
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 34 3.7
UniRef50_UPI00015A6D74 Cluster: Na(+)/H(+) exchange regulatory c... 33 4.8
UniRef50_Q1DCK1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 4.8
UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;... 33 6.4
UniRef50_Q3WJC1 Cluster: High-affinity nickel-transporter precur... 33 6.4
UniRef50_Q2S0X7 Cluster: Sensor protein; n=1; Salinibacter ruber... 33 8.4
UniRef50_Q1DF04 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_A7PYF4 Cluster: Chromosome chr15 scaffold_37, whole gen... 33 8.4
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 169 bits (412), Expect = 4e-41
Identities = 82/141 (58%), Positives = 89/141 (63%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 434
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYA 123
Query: 435 XXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDILKV 614
++GH IE++P P + K LKAW+DI KV
Sbjct: 124 ICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKV 183
Query: 615 YKSQRLRAGKGKMRNRRRIQR 677
Y SQR+RAGKGKMRNRRRIQR
Sbjct: 184 YASQRMRAGKGKMRNRRRIQR 204
Score = 84.2 bits (199), Expect = 3e-15
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +1
Query: 64 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 243
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 244 HQT 252
HQT
Sbjct: 60 HQT 62
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 157 bits (380), Expect = 3e-37
Identities = 76/141 (53%), Positives = 87/141 (61%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 434
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 67 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYA 126
Query: 435 XXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDILKV 614
Q++GH+I+ + FP + + LK W+DI KV
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 615 YKSQRLRAGKGKMRNRRRIQR 677
YKSQR RAG+G MR+RRRI R
Sbjct: 187 YKSQRFRAGRGTMRDRRRIAR 207
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = +1
Query: 58 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 237
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 238 AGHQT 252
AGHQT
Sbjct: 61 AGHQT 65
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 128 bits (308), Expect = 2e-28
Identities = 67/144 (46%), Positives = 77/144 (53%), Gaps = 3/144 (2%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 434
AESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 40 AESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLNQKRFA 99
Query: 435 XXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLK---AWSDI 605
ARGH + +P P + + LK A +D
Sbjct: 100 TASALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIRKTSAAVALLKAVGAGADC 159
Query: 606 LKVYKSQRLRAGKGKMRNRRRIQR 677
K S++LRAGKGK+R RR QR
Sbjct: 160 EKAKNSRKLRAGKGKLRGRRHKQR 183
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 127 bits (307), Expect = 2e-28
Identities = 68/144 (47%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 434
AESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 63 AESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRFA 122
Query: 435 XXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLK---AWSDI 605
ARGH I ++ P + ++ LK A D+
Sbjct: 123 TVSALAASGVPALLFARGHQISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDV 182
Query: 606 LKVYKSQRLRAGKGKMRNRRRIQR 677
KV S++LRAGKGK+R RR QR
Sbjct: 183 EKVKDSRKLRAGKGKLRGRRHRQR 206
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/60 (58%), Positives = 41/60 (68%)
Frame = +1
Query: 73 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 252
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 122 bits (294), Expect = 8e-27
Identities = 62/143 (43%), Positives = 75/143 (52%)
Frame = +3
Query: 249 NQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 428
+ A SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 HSAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKR 120
Query: 429 XXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDIL 608
+RGH I +P P + + A D+
Sbjct: 121 FAVVSALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVN 180
Query: 609 KVYKSQRLRAGKGKMRNRRRIQR 677
+V S+ +RAG+GKMRNRR + R
Sbjct: 181 RVNDSREIRAGRGKMRNRRYVAR 203
Score = 66.1 bits (154), Expect = 7e-10
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +1
Query: 73 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 243
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSG 58
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 113 bits (271), Expect = 5e-24
Identities = 61/144 (42%), Positives = 70/144 (48%)
Frame = +3
Query: 234 GGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXX 413
G AESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKIN 116
Query: 414 XXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKA 593
ARGH I + P + L
Sbjct: 117 LKEKRYAVCSSIAASGITSLVLARGHRISNLKEVPLVASNDIESMQKTKDALKFLISLGL 176
Query: 594 WSDILKVYKSQRLRAGKGKMRNRR 665
++ ++ KS +LRA GKMRNR+
Sbjct: 177 RDEVNRLIKSXKLRARXGKMRNRK 200
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +1
Query: 64 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 243
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 244 HQT 252
++T
Sbjct: 60 YET 62
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 112 bits (270), Expect = 7e-24
Identities = 57/143 (39%), Positives = 70/143 (48%)
Frame = +3
Query: 249 NQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 428
+ AESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 62 HSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRR 121
Query: 429 XXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDIL 608
ARGH I+ +P P + LKA D+
Sbjct: 122 FAMCSAIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVK 181
Query: 609 KVYKSQRLRAGKGKMRNRRRIQR 677
+S+R+R G GK RNRR QR
Sbjct: 182 HSAESKRIRVGSGKARNRRYTQR 204
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +1
Query: 82 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 249
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQ 61
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 111 bits (267), Expect = 2e-23
Identities = 60/152 (39%), Positives = 73/152 (48%)
Frame = +3
Query: 210 EAALLREQGGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 389
+A + Q G + AESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K W
Sbjct: 51 QAHAVNPQAGMQ-HSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVW 109
Query: 390 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXX 569
RRWH ARGH I ++P P + K
Sbjct: 110 RRWHRRVNIKQKRHAAATAVAATGIVPLVLARGHRISQVPQIPLVVEDKIESYEKTTDAL 169
Query: 570 XXXXXLKAWSDILKVYKSQRLRAGKGKMRNRR 665
A+ D+ KV ++ +RAG K R ++
Sbjct: 170 NFLKRFGAFEDVQKVVSTKVVRAGISKQRGKK 201
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 79 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 249
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQ 62
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 109 bits (263), Expect = 5e-23
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 401
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 181 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = +1
Query: 91 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 252
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQT
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQT 179
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 109 bits (263), Expect = 5e-23
Identities = 58/143 (40%), Positives = 71/143 (49%)
Frame = +3
Query: 249 NQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 428
+ AESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 59 HSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKK 118
Query: 429 XXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDIL 608
+ARGH I + P + L ++
Sbjct: 119 IAEAMAVAASAQASLVEARGHRISDVKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELK 178
Query: 609 KVYKSQRLRAGKGKMRNRRRIQR 677
+V KS+ +R GKGKMRNRR QR
Sbjct: 179 RVEKSRGVRCGKGKMRNRRYTQR 201
Score = 40.3 bits (90), Expect = 0.042
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = +1
Query: 85 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 249
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQ 58
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 109 bits (262), Expect = 6e-23
Identities = 60/143 (41%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Frame = +3
Query: 249 NQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 428
+ AESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 63 HSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKR 122
Query: 429 XXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXL-KAWSDI 605
ARGH I +P P + + K +
Sbjct: 123 HAVAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEE 182
Query: 606 LK-VYKSQRLRAGKGKMRNRRRI 671
+K + S +R GKGKMRNRRR+
Sbjct: 183 MKRIESSIAIRCGKGKMRNRRRV 205
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +1
Query: 64 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 243
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 244 HQ 249
HQ
Sbjct: 61 HQ 62
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 104 bits (250), Expect = 2e-21
Identities = 57/144 (39%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Frame = +3
Query: 249 NQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 428
+ A SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 62 HSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRR 121
Query: 429 XXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTK-XXXXXXXXXXXXXXXXLKAWSDI 605
ARGH I +P P + +K + A+SD+
Sbjct: 122 FAVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDV 181
Query: 606 LKVYKSQRLRAGKGKMRNRRRIQR 677
LKV S+ +RAG+GKMR R+ +R
Sbjct: 182 LKVIASKTVRAGQGKMRGRKIKER 205
Score = 50.0 bits (114), Expect = 5e-05
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = +1
Query: 73 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 249
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQ 61
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 103 bits (246), Expect = 5e-21
Identities = 53/137 (38%), Positives = 70/137 (51%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 434
A SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 59 AVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSA 118
Query: 435 XXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDILKV 614
+RG+ ++ IP P++ L + I++
Sbjct: 119 IFSAIASSSIVSIIVSRGYRVKTIPEIPFVIEDSIEKIPKTRDLIKILTTL-GINSIVRN 177
Query: 615 YKSQRLRAGKGKMRNRR 665
++L++GKGKMRNRR
Sbjct: 178 KLKRKLKSGKGKMRNRR 194
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 97.5 bits (232), Expect = 3e-19
Identities = 43/103 (41%), Positives = 55/103 (53%)
Frame = +3
Query: 210 EAALLREQGGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 389
+A + G+ + A SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ W
Sbjct: 49 QAYAISRMSGYQTS-ARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTW 107
Query: 390 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPSFP 518
R WH +RGH +E +P P
Sbjct: 108 RHWHRKINLKEKRLALAVSVAATASVPLVMSRGHRVESVPELP 150
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +1
Query: 70 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 249
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 250 T 252
T
Sbjct: 61 T 61
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 95.1 bits (226), Expect = 1e-18
Identities = 43/103 (41%), Positives = 57/103 (55%)
Frame = +3
Query: 210 EAALLREQGGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 389
+A + + G+ + A SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ W
Sbjct: 49 QAYAVSKMSGYQTS-ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVW 107
Query: 390 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPSFP 518
RRWH +RGH IE + P
Sbjct: 108 RRWHRKVNLKEKRQALASALAATAVVPVVMSRGHRIEALREVP 150
Score = 56.8 bits (131), Expect = 5e-07
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = +1
Query: 76 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 252
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QT
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQT 61
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 77.0 bits (181), Expect = 4e-13
Identities = 42/134 (31%), Positives = 57/134 (42%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 434
A SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 61 AISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRKFA 120
Query: 435 XXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDILKV 614
QARGH++ ++ P + + + D+ +V
Sbjct: 121 IASAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRV 180
Query: 615 YKSQRLRAGKGKMR 656
R+ KGK R
Sbjct: 181 LDGSVHRSSKGKFR 194
Score = 40.3 bits (90), Expect = 0.042
Identities = 19/58 (32%), Positives = 38/58 (65%)
Frame = +1
Query: 70 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 243
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAG 56
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 434
A+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 65 AKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNRKVKVSA 124
Query: 435 XXXXXXXXXXXXXXQARGHIIEKIPSFPWL 524
+RGH ++ + +FP +
Sbjct: 125 FKTALLSTLFETLVVSRGHSLKDVKNFPMI 154
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 72.9 bits (171), Expect = 6e-12
Identities = 49/141 (34%), Positives = 60/141 (42%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 434
A SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 60 AHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYA 113
Query: 435 XXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDILKV 614
+ARGH I +PS P + T + D+ +
Sbjct: 114 VASALAASANAALVEARGHRIADVPSIPLVVDT--DNVTKTKDALAIIKAVGVLRDVERC 171
Query: 615 YKSQRLRAGKGKMRNRRRIQR 677
S+ +RAG+GKMRNRR I R
Sbjct: 172 KDSRHIRAGRGKMRNRRYITR 192
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/57 (43%), Positives = 31/57 (54%)
Frame = +1
Query: 79 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 249
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQ 57
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 68.9 bits (161), Expect = 1e-10
Identities = 43/145 (29%), Positives = 59/145 (40%)
Frame = +3
Query: 231 QGGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXX 410
+G + ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEI 132
Query: 411 XXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLK 590
ARGH++EK+PS P + L
Sbjct: 133 NKKEKKLAIRSAIAATAYRSWVAARGHVVEKVPSLPVVVVGDAEKINRAKEAKKLFEALG 192
Query: 591 AWSDILKVYKSQRLRAGKGKMRNRR 665
W D+ + + ++RAGKGKMR RR
Sbjct: 193 LWPDVERAAEGVKIRAGKGKMRGRR 217
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/65 (47%), Positives = 40/65 (61%)
Frame = +3
Query: 483 RGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDILKVYKSQRLRAGKGKMRNR 662
RG++++ + P + K +KAWSD+LKVYKSQRLRAGKGKMRNR
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 663 RRIQR 677
RR+ R
Sbjct: 65 RRLHR 69
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 63.3 bits (147), Expect = 5e-09
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXX 431
AESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 58 AESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRA 116
Query: 432 XXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDILK 611
+ RGH+I+ +P P + + + W+D+ +
Sbjct: 117 ALRSALAATAKPEFVKERGHVIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVER 176
Query: 612 VYKSQRLRAGKGKMRNRRRIQ 674
++R+RAGKGK R RR ++
Sbjct: 177 AKSNRRIRAGKGKRRGRRYVK 197
Score = 36.7 bits (81), Expect = 0.52
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 79 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 252
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +T
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRT 56
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 585 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 677
LKAW+DI KVY SQR+RAGKGKMRNRR IQR
Sbjct: 115 LKAWNDIKKVYASQRMRAGKGKMRNRRPIQR 145
Score = 39.9 bits (89), Expect = 0.056
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +3
Query: 186 SRFYVQELEAALLREQGGWSPNQAESWGTGRAVARIPRVRGGG 314
S + + + + E G+ + AESWGTGRA +PRVRGGG
Sbjct: 32 SNLHKNDSQPYAVSESAGYQTS-AESWGTGRARGPMPRVRGGG 73
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +1
Query: 169 DLVNDVHVSMSKNSRQPYCVSKEAGHQT 252
D+VN VH ++ KN QPY VS+ AG+QT
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQT 52
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/60 (45%), Positives = 34/60 (56%)
Frame = +3
Query: 480 ARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDILKVYKSQRLRAGKGKMRN 659
++GH I ++P P + K LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 54.4 bits (125), Expect = 2e-06
Identities = 31/97 (31%), Positives = 40/97 (41%)
Frame = +3
Query: 387 WRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXX 566
WRRWH ARGH +E +P P +
Sbjct: 111 WRRWHRRVNIKEKRYAVCSAIAASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKA 170
Query: 567 XXXXXXLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 677
L A++DI KV S+ +R+GKGKMRNRR +QR
Sbjct: 171 VELLKQLGAYADIEKVKASRNVRSGKGKMRNRRYVQR 207
Score = 35.9 bits (79), Expect = 0.91
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 121 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 207
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/74 (40%), Positives = 35/74 (47%)
Frame = +2
Query: 194 LCPRTRGSPTA*ARRLVTKPGRIMGYRTCCCPNSACPWWWYP*VRSGCLR*HVSWWTYVR 373
L P RG P L G ++G+R C SA W VR C+R HV WW +VR
Sbjct: 99 LAPGVRGEPPVRHEPL----GALVGHRPRRCAYSAHQRRWNEHVRRRCVRQHVPWWPHVR 154
Query: 374 PHEALAALAPSRQP 415
E L LAP QP
Sbjct: 155 ADEDLPPLAPQDQP 168
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 50.4 bits (115), Expect = 4e-05
Identities = 33/137 (24%), Positives = 56/137 (40%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 434
AES+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 59 AESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLA 113
Query: 435 XXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDILKV 614
+ RGH + ++ P++ + L DI++
Sbjct: 114 IRSAIAATANKELVEQRGHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRA 173
Query: 615 YKSQRLRAGKGKMRNRR 665
K +++++GKGK+R R+
Sbjct: 174 KKGRKIKSGKGKLRGRK 190
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 45.6 bits (103), Expect = 0.001
Identities = 35/147 (23%), Positives = 55/147 (37%)
Frame = +3
Query: 225 REQGGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHX 404
R+ AES+G +AR+PRV+ SG+ A GGR+ P ++
Sbjct: 55 RDPNAGKRTSAESFGINLGMARVPRVKN-----SGEAALAPNTVGGRLAFPPSVNKKLAE 109
Query: 405 XXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXX 584
+ARGH+ + FP +
Sbjct: 110 EANVKEKRLAVISALSATADIAFVRARGHVFKDSVRFPIVVTDDIVNLKTTSEVEEFLKK 169
Query: 585 LKAWSDILKVYKSQRLRAGKGKMRNRR 665
+ + D+ +V + R+RAGKGKMR R+
Sbjct: 170 IGVYDDVERVKERIRIRAGKGKMRGRK 196
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 43.6 bits (98), Expect = 0.005
Identities = 32/140 (22%), Positives = 52/140 (37%)
Frame = +3
Query: 258 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 437
E+WG G AR+PR + G + GGR P KP R+W
Sbjct: 59 ENWGPGHGYARVPRWKLGR-----RAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKAL 113
Query: 438 XXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDILKVY 617
+ R H+ E P + + + ++D+ +
Sbjct: 114 KSAIAATANEELVRQRSHVFEG--ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAK 171
Query: 618 KSQRLRAGKGKMRNRRRIQR 677
+ +R RAG+GKMR RR +++
Sbjct: 172 ERKRYRAGRGKMRGRRYVKK 191
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 41.5 bits (93), Expect = 0.018
Identities = 38/139 (27%), Positives = 53/139 (38%), Gaps = 2/139 (1%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 434
A S G GR VAR+PR++G S + A NM RGGR P + +
Sbjct: 71 AVSLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPRVEKVLKEYINKKEKRLA 125
Query: 435 XXXXXXXXXXXXXXQARGH--IIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDIL 608
+ RGH E +P L + + + D+L
Sbjct: 126 TISAISATSREDLVRQRGHRFSAETLPIV--LDSSVLAKISTAREARSLLESVGVYEDVL 183
Query: 609 KVYKSQRLRAGKGKMRNRR 665
+ + +R AGKGKMR RR
Sbjct: 184 RAKEGKRYNAGKGKMRGRR 202
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 39.5 bits (88), Expect = 0.074
Identities = 23/66 (34%), Positives = 27/66 (40%)
Frame = +3
Query: 480 ARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDILKVYKSQRLRAGKGKMRN 659
ARGH IE +P P + A+ D K S + GKGKMRN
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRN 61
Query: 660 RRRIQR 677
RR I R
Sbjct: 62 RRYISR 67
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.22
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1
Query: 379 VGANIRPPRHMLPKAP*P 326
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 37.1 bits (82), Expect = 0.39
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 482 SLNERWDASSSNGCCQGRSPLSEVDATVPAPPGL 381
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein, partial - Pan troglodytes
Length = 366
Score = 36.7 bits (81), Expect = 0.52
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 225 REQGGWSPNQAESWGTGRAVARIPRVRGGGT-HRSGQGAFGNMCRGGRMFAPTKPWR 392
R QGG P +A + G +A+A + RGGG RSG+G+ C G + P PWR
Sbjct: 244 RRQGGKKPQKAAAAGGQKALAAGAKSRGGGAKSRSGRGS--KRCGGQK---PLAPWR 295
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 36.7 bits (81), Expect = 0.52
Identities = 24/79 (30%), Positives = 29/79 (36%)
Frame = +3
Query: 270 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXX 449
TG ARI R++GGG R G+ RGGR P K + H
Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAI 124
Query: 450 XXXXXXXXXQARGHIIEKI 506
RGHII+ I
Sbjct: 125 AATASKSTVAGRGHIIDGI 143
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 35.5 bits (78), Expect = 1.2
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 342 RRHPDRTYGYHHHGHAEFGQQHVR-YP 265
R PD +G+HHHGH G HV YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 285 ARIPRVRGGGTHRSGQGAFGNMCRGG 362
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 448
Score = 34.7 bits (76), Expect = 2.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 357 HDTCYRRHPDRTYGYHHHGHAEFG 286
HD C+ H + +G+HHH HA G
Sbjct: 109 HDHCHEHHHEHEHGHHHHHHASPG 132
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 34.3 bits (75), Expect = 2.8
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +3
Query: 225 REQGGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 365
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGGG----AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 161
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 369 TYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIR 256
+Y H + RH R+YG+ HH H + R P +R
Sbjct: 90 SYYHQEVSPGRHRSRSYGHRHHHHHRHSRSRSRGPDVR 127
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 33.9 bits (74), Expect = 3.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 357 HDTCYRRHPDRTYGYHHHGHAEFGQQH 277
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_UPI00015A6D74 Cluster: Na(+)/H(+) exchange regulatory
cofactor NHE-RF2 (NHERF-2) (Tyrosine kinase activator
protein 1) (TKA-1) (SRY-interacting protein 1) (SIP- 1)
(Solute carrier family 9 isoform A3 regulatory factor 2)
(NHE3 kinase A regulatory protein E3KARP)
(Sodium-hydroge; n=2; Danio rerio|Rep: Na(+)/H(+)
exchange regulatory cofactor NHE-RF2 (NHERF-2) (Tyrosine
kinase activator protein 1) (TKA-1) (SRY-interacting
protein 1) (SIP- 1) (Solute carrier family 9 isoform A3
regulatory factor 2) (NHE3 kinase A regulatory protein
E3KARP) (Sodium-hydroge - Danio rerio
Length = 385
Score = 33.5 bits (73), Expect = 4.8
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 348 CYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRPG 250
CY DR YG+H HG G Q++R I PG
Sbjct: 10 CYLTKGDRGYGFHLHGERNRGAQYIR--KIEPG 40
>UniRef50_Q1DCK1 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 1494
Score = 33.5 bits (73), Expect = 4.8
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +3
Query: 138 PVRIQGAHTSGPGQ*CSRFYVQELEAALLREQGGWSPNQAESWGTGRAVARIPRVRG 308
PV ++ +GP SR+ V+ E ++ GGWSP Q + G A P V G
Sbjct: 946 PVLVEAGTAAGP---VSRYNVETQERWMVALSGGWSPGQEKGRGIYMVDAWSPEVNG 999
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 4.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 358 PRHMLPKAP*PDLWVPPPR 302
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 194
Score = 33.1 bits (72), Expect = 6.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 360 HHDTCYRRHPDRTYGYHHHGHAEFGQQ 280
HH + RH DR +G HHHG G +
Sbjct: 132 HHTRHHTRHHDRHHGRHHHGRHHHGHR 158
>UniRef50_Q3WJC1 Cluster: High-affinity nickel-transporter
precursor; n=1; Frankia sp. EAN1pec|Rep: High-affinity
nickel-transporter precursor - Frankia sp. EAN1pec
Length = 543
Score = 33.1 bits (72), Expect = 6.4
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 360 HHDTCYRRHPDRTYGY-HHHGHAEFGQQHVRYPMIRPGLVTSLLA 229
HHD P R +G+ H HGH+ G+ HV P+ + SLLA
Sbjct: 402 HHD----HDPSRDHGHAHQHGHSHGGRWHVHPPVTDQPRLRSLLA 442
>UniRef50_Q2S0X7 Cluster: Sensor protein; n=1; Salinibacter ruber
DSM 13855|Rep: Sensor protein - Salinibacter ruber
(strain DSM 13855)
Length = 942
Score = 32.7 bits (71), Expect = 8.4
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 388 GGAGTVASTSDSGERPWQQPLLLLASQRSFRLEDTLL 498
GG GTV +T +G RP PL+LLAS + + +T+L
Sbjct: 146 GGGGTVLATL-TGPRPETSPLILLASMGTIAVVETVL 181
>UniRef50_Q1DF04 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 195
Score = 32.7 bits (71), Expect = 8.4
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 297 AEFGQQHVRYPMIRPGLVTSLLAHAVGLPRVLGH 196
+E G+ +R ++ PG + + LA +VGL V+GH
Sbjct: 101 SELGRHGIRVNVVAPGAIQTPLAESVGLIEVMGH 134
>UniRef50_A7PYF4 Cluster: Chromosome chr15 scaffold_37, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_37, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 750
Score = 32.7 bits (71), Expect = 8.4
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -3
Query: 515 EARNLFNNVSSSLNERWDASS-SNGCCQGRSPLSEVDA-TVPAPP 387
E + +F +SL E+W+ GCC G P S +D P+PP
Sbjct: 11 EGKGVFEICLNSLLEKWNKEEEEGGCCVGTEPTSVLDTRRSPSPP 55
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,941,223
Number of Sequences: 1657284
Number of extensions: 14503583
Number of successful extensions: 50358
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 46505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50001
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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