Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0190
(679 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 139 2e-33
07_01_0578 + 4295386-4296489,4297394-4297507 134 6e-32
10_02_0199 + 6668902-6669293,6669825-6669882 34 0.091
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 33 0.16
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 33 0.21
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 32 0.37
02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434... 31 1.1
05_03_0163 + 9070781-9071320 30 1.5
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 30 2.0
03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-96... 30 2.0
08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 29 2.6
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 29 3.4
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 29 4.5
10_07_0029 + 12031711-12032464,12044289-12044386 28 6.0
03_01_0092 - 731069-731434,731569-733080 28 6.0
02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,850... 28 6.0
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 28 7.9
11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361... 28 7.9
07_01_0469 - 3552409-3553368 28 7.9
05_05_0285 - 23855219-23855371,23855391-23856063,23856239-238563... 28 7.9
04_04_0463 - 25397837-25399693,25402136-25402405 28 7.9
04_01_0244 - 3194141-3195091,3195301-3195312 28 7.9
03_01_0147 - 1170481-1171260,1171332-1171511 28 7.9
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 139 bits (337), Expect = 2e-33
Identities = 71/141 (50%), Positives = 79/141 (56%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 434
AESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIA 126
Query: 435 XXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDILKV 614
ARGH IE +P FP + + A++D K
Sbjct: 127 VASALAATAVPSLVLARGHRIEGVPEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKT 186
Query: 615 YKSQRLRAGKGKMRNRRRIQR 677
S +RAGKGKMRNRR I R
Sbjct: 187 KDSVAIRAGKGKMRNRRYINR 207
Score = 61.7 bits (143), Expect = 5e-10
Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +1
Query: 67 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 243
+ ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 244 HQT 252
HQT
Sbjct: 63 HQT 65
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 134 bits (324), Expect = 6e-32
Identities = 68/141 (48%), Positives = 77/141 (54%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 434
AESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 68 AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVA 127
Query: 435 XXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PTKXXXXXXXXXXXXXXXXLKAWSDILKV 614
ARGH IE +P P + + A++D K
Sbjct: 128 VASALAATSVPSLVLARGHRIETVPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKA 187
Query: 615 YKSQRLRAGKGKMRNRRRIQR 677
S +R GKGKMRNRR I R
Sbjct: 188 KDSVGIRPGKGKMRNRRYINR 208
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = +1
Query: 76 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 249
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGHQ
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
Query: 250 T 252
T
Sbjct: 66 T 66
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 34.3 bits (75), Expect = 0.091
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +3
Query: 225 REQGGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 365
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGGG----AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 361 PPRHMLPKAP*PDLWVPPP 305
PPRH++P+ P P WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +3
Query: 39 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 194
ASL N + P+F V G SQA V + GAHT G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 39 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 194
ASL N I +PTF +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452,
26643948-26644120,26644227-26644308,26644623-26644758,
26644777-26644833,26644905-26645120,26645939-26646335,
26646458-26646544,26647063-26647324,26648892-26648972,
26649176-26650350
Length = 1221
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +3
Query: 225 REQGGWSPNQAESWGTGRAVARIPRVRGGGT--HRSGQGAF 341
R + GW +QA+ + + R P +GGG R GQG F
Sbjct: 1121 RREQGWDAHQAQVGAQHQNLPRFPPQQGGGNIGERQGQGQF 1161
>05_03_0163 + 9070781-9071320
Length = 179
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 225 REQGGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQG 335
R GGWS +AE WG G ++ GGG RS +G
Sbjct: 15 RGAGGWS-QRAEGWGGGGGRSQRAEGGGGGGGRSRRG 50
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 39 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 194
ASL N I +PT +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>03_01_0123 +
965657-966214,967827-967995,968632-969236,969333-969434
Length = 477
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 210 EAALLREQGGWSPNQAESWGTGRAV 284
EAALLR G W+ + WG G V
Sbjct: 367 EAALLRAAGDWARGAGQRWGVGDVV 391
>08_02_0105 +
12448808-12449152,12449218-12449409,12449520-12449685,
12449771-12450201
Length = 377
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 39 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 194
ASL+ N ++ +PT V ++ G S V + GAHT G + C+ F
Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Frame = +3
Query: 201 QELEAALLREQGGWSPNQAESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGR 365
+++ A ++GG S ++++ G++V + + R+R H G G+ G++ + GG+
Sbjct: 64 EKVSGAKSTDEGGGS-DKSKGSEVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGK 122
Query: 366 MFAPTKP-WR 392
M P P WR
Sbjct: 123 MLRPGFPKWR 132
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = -2
Query: 342 RRHPDRTYGYHHHGHAEFGQQHVRYPMIR---PGLVTSLLAHAVG 217
R H D +G+HHH H G H P + G +A A+G
Sbjct: 68 RAHGDHHHGHHHHHHGH-GHSHHHGPEVHGSGGGAAVMRVAKAIG 111
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 366 YVHHDTCYRRHPDRTYG 316
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRYHPRRANG 110
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 358 PRHMLPKAP*PDLWVPPPRTRGIRATARPVP-----HDSAWFG 245
P H++P P P L P P+++ R P HD+A G
Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAPPPQEQHDTAASG 309
>02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,
8509204-8509553,8509631-8509729,8509811-8510105,
8510200-8510405,8510498-8510689,8510766-8511163,
8511258-8511444,8511473-8511528,8511800-8511872,
8512012-8512872,8514353-8514778
Length = 1134
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 316 VPPPRTRGIRATARPVPHDSAWFGDQP 236
VP PRTRG R P + W G +P
Sbjct: 1038 VPRPRTRGRRRGPSPAIQKACWAGPRP 1064
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +3
Query: 246 PNQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 389
P + G G A + RV GGG+ G+GA + G + W
Sbjct: 77 PERRRQEGAGGRGAGVRRVEGGGSGAVGEGARAAVLGGAATIGARRLW 124
>11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,
3611984-3612217,3614113-3614138,3614446-3614633,
3615707-3617670,3617938-3618423,3618527-3618894
Length = 2207
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -2
Query: 645 PYQHEDAETCTP*GYQTMP*GAFRKMTACLVLLISWTLSATTKGSSE 505
P +D ETC Q P +K+T CL+ ++S LS T SE
Sbjct: 2144 PQLQQDLETC-----QETPMAIKKKLTDCLLSVLSIGLSCTKSSPSE 2185
>07_01_0469 - 3552409-3553368
Length = 319
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 366 YVHHDTCYRRHPDRTYG 316
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRFHPRRASG 110
>05_05_0285 -
23855219-23855371,23855391-23856063,23856239-23856301,
23856478-23856604,23856751-23856897,23856968-23856974,
23857203-23857379
Length = 448
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 386 LAALAPSRQPPTAESGLGSSRCCYWRPSARS 478
+A AP AESG+G+ C +WR S S
Sbjct: 306 IAKDAPPAVEVKAESGVGTLGCAFWRTSLGS 336
>04_04_0463 - 25397837-25399693,25402136-25402405
Length = 708
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 539 GLCRLQPREARNLFNNVSSSLNERWDASSSNGCCQGRSPLSEVDATVPAP 390
GLC P + SS R A++S C+G + ++ +VPAP
Sbjct: 15 GLCVHVPEAEEGEREDCSSERRRRLPAAASGARCRGEAAVTVGPESVPAP 64
>04_01_0244 - 3194141-3195091,3195301-3195312
Length = 320
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 366 YVHHDTCYRRHPDRTYG 316
Y+ HDT YR HP R G
Sbjct: 98 YIFHDTAYRFHPRRANG 114
>03_01_0147 - 1170481-1171260,1171332-1171511
Length = 319
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 33 GIASLK*R-NESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 194
G ASL+ ++I +PTF++ + G +Q V + GAHT G C+ F
Sbjct: 139 GTASLEPEVADNIPAPTFTLDQLTQSFAAKGLTQEEMVTLSGAHTVGRAH-CTSF 192
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,351,232
Number of Sequences: 37544
Number of extensions: 455138
Number of successful extensions: 1881
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1869
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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