Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0188
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    26   0.32 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   0.98 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   0.98 
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   3.0  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   5.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.9  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.1  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 405 SQQMYSYKMSGGFTSNGNNTT 467
           S QM SY+ +G  T +G+NT+
Sbjct: 242 SPQMQSYRPTGNITPHGSNTS 262


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 316 SRAPQAPPVAPRSPILQPLPVSTSS 242
           S  P +P    RSP    LP+STSS
Sbjct: 192 SMYPLSPGAGFRSPYPSALPISTSS 216


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 316 SRAPQAPPVAPRSPILQPLPVSTSS 242
           S  P +P    RSP    LP+STSS
Sbjct: 84  SMYPLSPGAGFRSPYPSALPISTSS 108


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +3

Query: 225 RTKYIKELVDTGSGCRMGERGATGGAWGARDDASWW 332
           RTK + ++  T +G     R  +       DD S+W
Sbjct: 104 RTKILAQVHGTNNGTNKNMRRLSTTTQNKNDDPSYW 139


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 324 SWWPSSAGELQHQQQLNEEIGTSTATTSQQMYSYK 428
           SW  S++     +   +E++ T T T     Y YK
Sbjct: 12  SWLKSNSSLAGFEVNSSEQLTTPTPTDINSFYFYK 46


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 396 ATTSQQMYSYKMSGGFTSNGNNTTPS 473
           A+    M +  M GG   NGN  T S
Sbjct: 47  ASFGSSMLNSGMPGGMAMNGNGMTSS 72


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 469 GVVLFPLDVKPPDILYEYIC 410
           GVVL PLD +  +I  + IC
Sbjct: 450 GVVLNPLDARCNEIRPDAIC 469


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 570 DACCESTPPDEY 535
           D  CE+ P DEY
Sbjct: 31  DELCENRPADEY 42


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 570 DACCESTPPDEY 535
           D  CE+ P DEY
Sbjct: 31  DELCENRPADEY 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,204
Number of Sequences: 336
Number of extensions: 3327
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)