Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0188
(670 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0291 - 11791116-11791724 32 0.36
01_01_0327 + 2659822-2660232,2660906-2660959 32 0.36
11_01_0771 + 6453130-6454488 30 1.5
03_02_0878 + 12088119-12088233,12088511-12088608,12088689-120887... 30 1.9
01_06_1598 + 38535077-38535368,38536381-38536463,38536575-385366... 30 1.9
03_02_0458 + 8643804-8643904,8643994-8644091,8644206-8644504,864... 29 2.5
10_08_0338 + 16916429-16916650,16916728-16917900 29 4.4
05_03_0038 + 7612866-7613132,7615691-7616608 29 4.4
01_01_0854 + 6662533-6662652,6662727-6662996,6663118-6663171,666... 29 4.4
08_01_0874 + 8575718-8576422,8576603-8576662,8576799-8576945,857... 28 5.9
07_01_0091 - 692416-693906 28 5.9
05_07_0308 + 29115892-29116083,29116771-29116885,29116978-291170... 28 5.9
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 28 5.9
03_06_0063 - 31391870-31392679 28 5.9
11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142 28 7.7
08_01_0797 + 7711772-7712869 28 7.7
07_01_0821 + 6631942-6632144,6632155-6632680,6634264-6634619,663... 28 7.7
04_03_0496 + 16549333-16549465,16549620-16550020,16550412-165508... 28 7.7
03_06_0033 - 31186076-31186189,31186274-31186396,31186524-311867... 28 7.7
03_02_0630 + 9964593-9964738,9965548-9965603,9965895-9966745,996... 28 7.7
03_01_0426 + 3292358-3292780,3292858-3293094,3293166-3293759 28 7.7
>05_03_0291 - 11791116-11791724
Length = 202
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -1
Query: 379 SSFNCCWCCSSPALLGHHEASSRAPQAPPVAPRSPILQPLPVSTSSFMYFVLFEA 215
S C +SP + GH + AP PP+ P+ +S S+F F+LF A
Sbjct: 15 SEIRICTRVNSPTVAGHRGGADFAPPQPPLLGLPPLDDANDLSLSAF--FILFAA 67
>01_01_0327 + 2659822-2660232,2660906-2660959
Length = 154
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 352 SSPALLGHHEASSRAPQAPPV-APRSPILQPLPV 254
SSP LG AS+R APP PR P L PL V
Sbjct: 92 SSPRTLGRSSASARGDDAPPFHLPRRPPLPPLLV 125
>11_01_0771 + 6453130-6454488
Length = 452
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 315 DDASWWPSSAGELQHQQ--QLNEEIGTSTATTSQQM 416
DD S WP G++QH+ ++NEE + A T +M
Sbjct: 375 DDGSGWPLFVGDIQHKAVIEVNEEGTVAAAATMTRM 410
>03_02_0878 +
12088119-12088233,12088511-12088608,12088689-12088795,
12088900-12088974,12089053-12089124,12089221-12089382,
12089476-12089550,12089635-12089706,12089813-12089884,
12090150-12090224,12090329-12090400,12090491-12090625,
12090712-12091187,12091270-12091779,12091876-12092111,
12092200-12092712
Length = 954
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +3
Query: 375 EEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSYEYRIMSNSNTRKLHLSNNGGTHQEV* 554
+E+G+ + + S + SG ++ N + Y + I N + L +S NGG +
Sbjct: 145 DELGSLPKLSYMALNSNQFSGKIPASMGNLSNLYWFDIADNQLSGPLPISTNGGMGLDKL 204
Query: 555 THNKHLH 575
KH H
Sbjct: 205 FKTKHFH 211
>01_06_1598 +
38535077-38535368,38536381-38536463,38536575-38536643,
38537127-38537182,38537275-38537354,38537496-38537578,
38537682-38537759,38538133-38538201,38538366-38538434,
38538520-38538566,38538656-38538746,38538839-38538892
Length = 356
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 255 TGSGCRMGERGATGGAWGARDDASWW 332
+G G R+G RGA GG G D +WW
Sbjct: 38 SGGGGRLGARGAAGG--GRGDLGAWW 61
>03_02_0458 +
8643804-8643904,8643994-8644091,8644206-8644504,
8645930-8646460
Length = 342
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 343 ALLGHHEASSRAPQAPPVAPRSPILQPLPVS 251
A HH PQAPP P QP+P S
Sbjct: 2 AFFSHHHLQQPHPQAPPPPPPQQQQQPVPPS 32
>10_08_0338 + 16916429-16916650,16916728-16917900
Length = 464
Score = 28.7 bits (61), Expect = 4.4
Identities = 24/78 (30%), Positives = 29/78 (37%), Gaps = 10/78 (12%)
Frame = +3
Query: 258 GSGCRMGERGATGGAWGARDDASWWPSSAGELQHQQQLNEEIGTSTATTSQ--------- 410
GSG + G GA G WG + + + S G N A TSQ
Sbjct: 310 GSGYQGGPPGANRGPWGGQAPSGYGTGSYGGNAGYAAWNNSSAGGNAPTSQAAGAGTGYG 369
Query: 411 -QMYSYKMSGGFTSNGNN 461
Q Y Y GG S GN+
Sbjct: 370 SQGYGYGGYGGDASYGNH 387
>05_03_0038 + 7612866-7613132,7615691-7616608
Length = 394
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -1
Query: 334 GHHEASSRAPQAPPVAPRSPILQPLPVST 248
G E SSR PQ PP P PI PL + T
Sbjct: 56 GDGEGSSRQPQTPPHQPNVPI-GPLRIHT 83
>01_01_0854 +
6662533-6662652,6662727-6662996,6663118-6663171,
6663723-6663784,6663940-6664008,6664082-6664133,
6664287-6664460
Length = 266
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 337 LGHHEASSRAPQAPPVAPR 281
L HH A++RAP PP PR
Sbjct: 14 LPHHRATTRAPPTPPRIPR 32
>08_01_0874 +
8575718-8576422,8576603-8576662,8576799-8576945,
8577390-8577527
Length = 349
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = +3
Query: 300 AWGARDDASWWPSSAGELQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSYE 479
A+G+R +A+ S G ++ +++ +SGG + + +NT+ +
Sbjct: 79 AYGSRRNAAGTCSETGNRPRRETAGQDLLDHLKERVNSSRKRSLSGGSSPSSSNTSSAGS 138
Query: 480 YRIMSNSNTRKLHLS 524
S S +R+LH S
Sbjct: 139 LSSSSRSISRQLHRS 153
>07_01_0091 - 692416-693906
Length = 496
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -1
Query: 313 RAPQAPPVAPRSPIL-QPLPV 254
RAP PP APR+P+ PLP+
Sbjct: 222 RAPPPPPPAPRAPVYHHPLPL 242
>05_07_0308 +
29115892-29116083,29116771-29116885,29116978-29117087,
29118225-29118350,29118450-29118570,29118665-29118749,
29118854-29118967,29119061-29119100,29119517-29119665,
29120223-29120412,29121674-29122228,29123588-29123815,
29123904-29124044,29124134-29124334,29124447-29124728
Length = 882
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 479 ISNYV*F*HKEASPQQQWWYSSGGVDSQQA 568
I Y F + S Q+WW+S G D Q A
Sbjct: 331 IHRYAPFLNTPISAAQRWWFSQGPSDGQNA 360
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 328 HEASSRAPQAPPVAPRSPILQPLPVST 248
H A A + PP +PR P++ P+ T
Sbjct: 71 HRAGGEAHRPPPGSPRQPVISPMKDGT 97
>03_06_0063 - 31391870-31392679
Length = 269
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = -1
Query: 379 SSFNCCWC---CSSPALLGHHEASSRAPQAPPVAPRSPILQPLPVS 251
+ F C C SS LG H+ S R P P +P+L P PV+
Sbjct: 95 AEFKCSVCGKSFSSYQALGGHKTSHRVKL--PTPPAAPVLAPAPVA 138
>11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142
Length = 751
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +3
Query: 258 GSGCRMGERGATGGAWGARDDASWWPSSAGELQH 359
GSG GE G GG G R A WW GE QH
Sbjct: 682 GSGMGGGEWG--GGEMG-RIMAQWWMGRRGESQH 712
>08_01_0797 + 7711772-7712869
Length = 365
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 367 CCWCCSSPALLGHHEASSRAPQAPPVAPRSPI 272
C W SSP L ++S P++P PRS +
Sbjct: 102 CNWSRSSPRLFDSSDSSRFGPRSPLFIPRSDL 133
>07_01_0821 +
6631942-6632144,6632155-6632680,6634264-6634619,
6634683-6634877,6635419-6635623
Length = 494
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 348 ELQHQQQLNEEIGTSTATTSQQMYSYKMSG 437
EL+HQ+Q+N ++ +TA + S SG
Sbjct: 446 ELRHQEQMNRKLSIATAAEEAKQLSIPCSG 475
>04_03_0496 +
16549333-16549465,16549620-16550020,16550412-16550880,
16552038-16552076,16553151-16553272,16553531-16553677,
16554097-16554186,16554274-16554398,16554567-16554772,
16554951-16555075,16555528-16555722,16556295-16556337,
16556762-16557267,16558198-16558570,16559772-16560062,
16560132-16561101,16561196-16561892,16562378-16562658,
16562731-16563400,16563860-16564034,16565103-16565659
Length = 2204
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 198 TYVMSSQSVLEFVTNNTKQNRMVKLMIFVFLSLRL 94
TY+ QS+ + NN + R++ L I FL+LR+
Sbjct: 883 TYIGDKQSLYLNLVNNLRLPRLIPLHIDTFLALRI 917
>03_06_0033 -
31186076-31186189,31186274-31186396,31186524-31186718,
31186805-31186930,31187024-31187186,31187270-31187405,
31187557-31187916,31188026-31188124,31188222-31188489
Length = 527
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -1
Query: 358 CCSSPALLGHHEASSRAPQAPPVAPRSPILQPLPVSTSS 242
C SS L ASS P PP P + I QP+P+ + S
Sbjct: 177 CSSSGGGLKESAASSTRPPFPPSIPSNKI-QPMPIVSVS 214
>03_02_0630 +
9964593-9964738,9965548-9965603,9965895-9966745,
9966848-9967046,9967246-9967425,9967591-9967967,
9968625-9968765
Length = 649
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 334 GHHEASSRAPQAPPVAPRSPILQPLPVSTSSFMY 233
G E + R P+A P P PI +P+ SSF Y
Sbjct: 129 GTSEKTKRPPKAKPSTPSEPI---VPIRRSSFSY 159
>03_01_0426 + 3292358-3292780,3292858-3293094,3293166-3293759
Length = 417
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 342 RYLATTRHRRAHPK-RPPSRPVHPSYNR 262
R A H R P+ RPPS P HP + R
Sbjct: 191 RVRALHEHHRTPPRPRPPSPPQHPRHRR 218
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,862,420
Number of Sequences: 37544
Number of extensions: 353544
Number of successful extensions: 1760
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1753
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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