Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0188
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-5|AAA81483.2| 174|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 30 1.7
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 29 2.3
AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in ... 29 2.3
AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in ... 29 2.3
AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in ... 29 2.3
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 29 2.3
AC006634-3|AAF39795.3| 535|Caenorhabditis elegans Hypothetical ... 29 2.3
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z46794-10|CAH04745.1| 417|Caenorhabditis elegans Hypothetical p... 29 3.0
U64601-4|AAB04574.1| 163|Caenorhabditis elegans Hypothetical pr... 29 3.0
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 29 3.0
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 29 3.9
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 28 5.2
U39997-8|AAA81100.1| 718|Caenorhabditis elegans Hypothetical pr... 28 5.2
U67949-1|AAL06028.2| 633|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81030-11|CAE17704.1| 100|Caenorhabditis elegans Hypothetical p... 27 9.1
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 27 9.1
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 9.1
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z69302-3|CAA93266.1| 442|Caenorhabditis elegans Hypothetical pr... 27 9.1
>U40799-5|AAA81483.2| 174|Caenorhabditis elegans Hypothetical
protein F42C5.6 protein.
Length = 174
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/79 (22%), Positives = 35/79 (44%)
Frame = +1
Query: 415 CTHIKCRVALHLMETILLPVMNIELCLILTQGSFTSATMVVLIRRCRLTTSIFTDVAESV 594
C H+ HL I++ ++ + +CL+L +F +L + T A+ V
Sbjct: 96 CGHLNKECCFHLRVWIVIMIIVLPICLVLPASTFLIRR--ILCSSSQQPTGRAPSAADRV 153
Query: 595 KSEAIKQSTSERYSTESSV 651
+ A + ST+ R ++ V
Sbjct: 154 RQLAAEDSTTFRRDSDDMV 172
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 352 SSPALLGHHEASSRAPQAPPVAPRSPILQPLPVSTSS 242
++PA H+ S P+ P V P S Q PVS +S
Sbjct: 119 TTPATTSQHQQSIATPKPPVVRPPSAATQQQPVSVTS 155
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 336 SSAGELQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSYEYRIMSNSNT 506
S G +QQQ N+ + S Q Y + GF NGNN R +N ++
Sbjct: 965 SGPGHYHYQQQSNQNLSRPQRPGSNQGYQMNNNRGF--NGNNQQQHQNRRSFNNQSS 1019
>AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform b protein.
Length = 871
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 336 SSAGELQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSYEYRIMSNSNT 506
S G +QQQ N+ + S Q Y + GF NGNN R +N ++
Sbjct: 723 SGPGHYHYQQQSNQNLSRPQRPGSNQGYQMNNNRGF--NGNNQQQHQNRRSFNNQSS 777
>AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform d protein.
Length = 807
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 336 SSAGELQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSYEYRIMSNSNT 506
S G +QQQ N+ + S Q Y + GF NGNN R +N ++
Sbjct: 659 SGPGHYHYQQQSNQNLSRPQRPGSNQGYQMNNNRGF--NGNNQQQHQNRRSFNNQSS 713
>AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in germ
line developmentprotein 2, isoform c protein.
Length = 1036
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 336 SSAGELQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSYEYRIMSNSNT 506
S G +QQQ N+ + S Q Y + GF NGNN R +N ++
Sbjct: 888 SGPGHYHYQQQSNQNLSRPQRPGSNQGYQMNNNRGF--NGNNQQQHQNRRSFNNQSS 942
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in germ
line developmentprotein 2, isoform a protein.
Length = 1113
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 336 SSAGELQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSYEYRIMSNSNT 506
S G +QQQ N+ + S Q Y + GF NGNN R +N ++
Sbjct: 965 SGPGHYHYQQQSNQNLSRPQRPGSNQGYQMNNNRGF--NGNNQQQHQNRRSFNNQSS 1019
>AC006634-3|AAF39795.3| 535|Caenorhabditis elegans Hypothetical
protein F35F11.1 protein.
Length = 535
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1
Query: 334 GHHEASSRAPQAPPVAPRSPILQPLPVSTSS 242
GHH A +AP APP P P+ +P+ + TSS
Sbjct: 324 GHH-AVQKAPDAPPGRP--PLAKPIQLLTSS 351
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 339 SAGELQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSYE 479
+A + Q QQQ ++ AT +Q M GG + N++P Y+
Sbjct: 192 AAMQQQRQQQQQNQVQQMLATQAQLMDEISDGGGTNDSDRNSSPFYQ 238
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 339 SAGELQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSYE 479
+A + Q QQQ ++ AT +Q M GG + N++P Y+
Sbjct: 192 AAMQQQRQQQQQNQVQQMLATQAQLMDEISDGGGTNDSDRNSSPFYQ 238
>Z46794-10|CAH04745.1| 417|Caenorhabditis elegans Hypothetical
protein R06F6.12 protein.
Length = 417
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/63 (22%), Positives = 28/63 (44%)
Frame = +3
Query: 354 QHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSYEYRIMSNSNTRKLHLSNNG 533
Q++Q+ NEE+ + ++ + F +GN Y+ N + L+N+G
Sbjct: 125 QNEQEHNEEVVIEDGSHHHMVHHEMIENQFEGDGNGPEEEYDGNGQIIDNAMHIILTNDG 184
Query: 534 GTH 542
G +
Sbjct: 185 GVN 187
>U64601-4|AAB04574.1| 163|Caenorhabditis elegans Hypothetical
protein M03F4.4 protein.
Length = 163
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = -1
Query: 430 ILYEYIC*-LVVAVLVPISSFNC--CWCCSSPALLGHHEASSRAPQA 299
+L+ +C LV AVL+P+ F CSS L H+ +SS +PQA
Sbjct: 116 LLFANVCNALVAAVLLPLRMFRLHKIASCSSFNTLPHYISSSSSPQA 162
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical
protein C27F2.8 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 402 TSQQMYSYKMSGGFTSNGNNTTPSYEYRIMSNSNTRK 512
TS +++YKM G SN +P YR+ NS+ K
Sbjct: 83 TSVGVFTYKMQGNCDSNPYRISPFTGYRLPMNSSISK 119
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -1
Query: 331 HHEASSRAPQAPPVAPRSPILQPLPVSTS 245
HHE+ SRA A PV S P P TS
Sbjct: 381 HHESRSRAAAAAPVGASSQSKPPAPSPTS 409
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 28.3 bits (60), Expect = 5.2
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Frame = +3
Query: 285 GATGGAWGARDDASWWPSSAGELQHQQQLNEEIGTST---ATTSQQMYSYKMSGGFTSNG 455
G +GG+WG S G N+ G+S +Q + GG++ NG
Sbjct: 367 GNSGGSWGNGGTGGSGGSGGGNWGD----NDNYGSSNKWNGNGNQDNDNDNFGGGYSKNG 422
Query: 456 --NNTTPSYEYRIMSNSNTRKLHLSNNGGT 539
+N + + S++N + +NNGGT
Sbjct: 423 YGSNNNRNDGWGSSSSNNNNNNNNNNNGGT 452
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 28.3 bits (60), Expect = 5.2
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Frame = +3
Query: 285 GATGGAWGARDDASWWPSSAGELQHQQQLNEEIGTST---ATTSQQMYSYKMSGGFTSNG 455
G +GG+WG S G N+ G+S +Q + GG++ NG
Sbjct: 367 GNSGGSWGNGGTGGSGGSGGGNWGD----NDNYGSSNKWNGNGNQDNDNDNFGGGYSKNG 422
Query: 456 --NNTTPSYEYRIMSNSNTRKLHLSNNGGT 539
+N + + S++N + +NNGGT
Sbjct: 423 YGSNNNRNDGWGSSSSNNNNNNNNNNNGGT 452
>U39997-8|AAA81100.1| 718|Caenorhabditis elegans Hypothetical
protein F56D1.2 protein.
Length = 718
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/89 (22%), Positives = 37/89 (41%)
Frame = +1
Query: 400 LQVNKCTHIKCRVALHLMETILLPVMNIELCLILTQGSFTSATMVVLIRRCRLTTSIFTD 579
+ +N CR +HL + P C LT S + +L ++CR++T +
Sbjct: 163 MYINGVKEWPCR-GIHLSSRVQYPTRFSYSCFRLTSFSVYAINATILPQKCRVSTIMTAP 221
Query: 580 VAESVKSEAIKQSTSERYSTESSVDPHTA 666
+ + E + T+ + S + DP A
Sbjct: 222 YFDDMFPEILVDPTTNQ-SIITKTDPFWA 249
>U67949-1|AAL06028.2| 633|Caenorhabditis elegans Hypothetical
protein F55A4.10 protein.
Length = 633
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/90 (23%), Positives = 38/90 (42%)
Frame = +1
Query: 400 LQVNKCTHIKCRVALHLMETILLPVMNIELCLILTQGSFTSATMVVLIRRCRLTTSIFTD 579
L+ ++ +KC L +ET+ LP++N I G + L++SI
Sbjct: 112 LEEDQSVTVKCIYGLPTVETMTLPIINSNF-NIDNFGHPEAEIRTTSSNSSDLSSSISQS 170
Query: 580 VAESVKSEAIKQSTSERYSTESSVDPHTAA 669
A E+ K+S + + S+D + A
Sbjct: 171 RASLSVDESTKESMHQSFENSESIDSNQRA 200
>Z81030-11|CAE17704.1| 100|Caenorhabditis elegans Hypothetical
protein C01G10.15 protein.
Length = 100
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 390 STATTSQQMYSYKMSGGFTSNGNNTTPSYEYRIMSNSNTRKLHLSNNGGTH 542
STA + +Y Y + G+ +N NN +Y Y +N+N +NNG T+
Sbjct: 15 STAN-AYYLYYYYPNNGYNNNNNNGYTTYYYYPNNNNN------NNNGQTY 58
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +3
Query: 261 SGCRMGERGATGGAWGARDDASWWPSSAGELQHQQQLNEEIGTSTA 398
S RM + G G WG D+ S W + Q N + S +
Sbjct: 2161 SKMRMFDEGKVGNIWGKSDEDSAWGGLFSQFLPQLGANSSLNNSNS 2206
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +3
Query: 261 SGCRMGERGATGGAWGARDDASWWPSSAGELQHQQQLNEEIGTSTA 398
S RM + G G WG D+ S W + Q N + S +
Sbjct: 2183 SKMRMFDEGKVGNIWGKSDEDSAWGGLFSQFLPQLGANSSLNNSNS 2228
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +3
Query: 261 SGCRMGERGATGGAWGARDDASWWPSSAGELQHQQQLNEEIGTSTA 398
S RM + G G WG D+ S W + Q N + S +
Sbjct: 1004 SKMRMFDEGKVGNIWGKSDEDSAWGGLFSQFLPQLGANSSLNNSNS 1049
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +3
Query: 261 SGCRMGERGATGGAWGARDDASWWPSSAGELQHQQQLNEEIGTSTA 398
S RM + G G WG D+ S W + Q N + S +
Sbjct: 982 SKMRMFDEGKVGNIWGKSDEDSAWGGLFSQFLPQLGANSSLNNSNS 1027
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +3
Query: 261 SGCRMGERGATGGAWGARDDASWWPSSAGELQHQQQLNEEIGTSTA 398
S RM + G G WG D+ S W + Q N + S +
Sbjct: 2161 SKMRMFDEGKVGNIWGKSDEDSAWGGLFSQFLPQLGANSSLNNSNS 2206
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +3
Query: 261 SGCRMGERGATGGAWGARDDASWWPSSAGELQHQQQLNEEIGTSTA 398
S RM + G G WG D+ S W + Q N + S +
Sbjct: 2183 SKMRMFDEGKVGNIWGKSDEDSAWGGLFSQFLPQLGANSSLNNSNS 2228
>Z69302-3|CAA93266.1| 442|Caenorhabditis elegans Hypothetical
protein F40F8.8 protein.
Length = 442
Score = 27.5 bits (58), Expect = 9.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 370 NCCWCCSSPAL 338
NCCWCC AL
Sbjct: 167 NCCWCCQRGAL 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,401,346
Number of Sequences: 27780
Number of extensions: 297069
Number of successful extensions: 1219
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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