Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0186
         (645 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084153-1|AAK84596.1|  385|Caenorhabditis elegans Hypothetical ...    31   0.92 
Z99268-1|CAB16466.1|  715|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z81573-4|CAB04627.1|  715|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z49908-10|CAA90103.1|  715|Caenorhabditis elegans Hypothetical p...    28   6.5  
EU068465-1|ABU49430.1|  715|Caenorhabditis elegans PRO-2 protein.      28   6.5  
Z92807-5|CAB07265.1|  480|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AL021482-5|CAA16342.1|  480|Caenorhabditis elegans Hypothetical ...    27   8.6  
AC025715-2|AAK68447.2|  439|Caenorhabditis elegans Hypothetical ...    27   8.6  

>AC084153-1|AAK84596.1|  385|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.7 protein.
          Length = 385

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = -3

Query: 571 KFTTNYERARLQMEKKNRK*SKLVIEKSNIRLL-RIEYLQKIINYRQKRRSNRPSRKLHR 395
           +F+TN+     ++ K   K  ++   + N+R++  IE ++  + + +KRR  RP    H+
Sbjct: 179 RFSTNFRSKDRKLLKTCGKSIEIAANEFNLRIVAEIEMIENHLKFDEKRREKRPPPPTHQ 238


>Z99268-1|CAB16466.1|  715|Caenorhabditis elegans Hypothetical
           protein C07E3.2 protein.
          Length = 715

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 191 LIIVII*SWGKIDIPS-IKSKLGCCQVLVQLKRSC 292
           LI VI+  +   + P+ +  +L CCQ+L+QL+ SC
Sbjct: 439 LIQVIVGIFKLCNAPTFLPLRLHCCQLLIQLQASC 473


>Z81573-4|CAB04627.1|  715|Caenorhabditis elegans Hypothetical
           protein C07E3.2 protein.
          Length = 715

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 191 LIIVII*SWGKIDIPS-IKSKLGCCQVLVQLKRSC 292
           LI VI+  +   + P+ +  +L CCQ+L+QL+ SC
Sbjct: 439 LIQVIVGIFKLCNAPTFLPLRLHCCQLLIQLQASC 473


>Z49908-10|CAA90103.1|  715|Caenorhabditis elegans Hypothetical
           protein C07E3.2 protein.
          Length = 715

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 191 LIIVII*SWGKIDIPS-IKSKLGCCQVLVQLKRSC 292
           LI VI+  +   + P+ +  +L CCQ+L+QL+ SC
Sbjct: 439 LIQVIVGIFKLCNAPTFLPLRLHCCQLLIQLQASC 473


>EU068465-1|ABU49430.1|  715|Caenorhabditis elegans PRO-2 protein.
          Length = 715

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 191 LIIVII*SWGKIDIPS-IKSKLGCCQVLVQLKRSC 292
           LI VI+  +   + P+ +  +L CCQ+L+QL+ SC
Sbjct: 439 LIQVIVGIFKLCNAPTFLPLRLHCCQLLIQLQASC 473


>Z92807-5|CAB07265.1|  480|Caenorhabditis elegans Hypothetical
           protein K11D9.3 protein.
          Length = 480

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = +1

Query: 466 RFVVIECYFFQLPALIIFCFFFPSEA*LFHN 558
           R   I C    LPALII  F FP      HN
Sbjct: 196 RMSSIACAVAALPALIIIVFVFPESPTWLHN 226


>AL021482-5|CAA16342.1|  480|Caenorhabditis elegans Hypothetical
           protein K11D9.3 protein.
          Length = 480

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = +1

Query: 466 RFVVIECYFFQLPALIIFCFFFPSEA*LFHN 558
           R   I C    LPALII  F FP      HN
Sbjct: 196 RMSSIACAVAALPALIIIVFVFPESPTWLHN 226


>AC025715-2|AAK68447.2|  439|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.6 protein.
          Length = 439

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -1

Query: 570 SLRRIMKELG-FRWKKKTEN 514
           +LR   KE+G FRWKK TEN
Sbjct: 416 TLRNSHKEVGVFRWKKLTEN 435


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,233,572
Number of Sequences: 27780
Number of extensions: 222624
Number of successful extensions: 462
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)