Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0185
         (675 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr...    32   0.43 
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr...    32   0.43 
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr...    32   0.43 
Z78066-2|CAB01524.2|  257|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z71186-7|CAM35835.1|  552|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical protein
            C37C3.6c protein.
          Length = 1487

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +3

Query: 300  CGCYF--HGCCKDGVSVAHGQVTQAC 371
            CGC F  +GCC DG SVA G     C
Sbjct: 964  CGCEFAQYGCCPDGKSVAKGAGFYGC 989



 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 300 CGCYFHGCCKDGVSVAHGQVTQACQ 374
           C    +GCCKD  ++A G     C+
Sbjct: 884 CAASLYGCCKDRKTIAFGPHYSGCE 908


>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
            C37C3.6a protein.
          Length = 1558

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +3

Query: 300  CGCYF--HGCCKDGVSVAHGQVTQAC 371
            CGC F  +GCC DG SVA G     C
Sbjct: 964  CGCEFAQYGCCPDGKSVAKGAGFYGC 989



 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 300 CGCYFHGCCKDGVSVAHGQVTQACQ 374
           C    +GCCKD  ++A G     C+
Sbjct: 884 CAASLYGCCKDRKTIAFGPHYSGCE 908


>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
            C37C3.6b protein.
          Length = 2167

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +3

Query: 300  CGCYF--HGCCKDGVSVAHGQVTQAC 371
            CGC F  +GCC DG SVA G     C
Sbjct: 964  CGCEFAQYGCCPDGKSVAKGAGFYGC 989



 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 300 CGCYFHGCCKDGVSVAHGQVTQACQ 374
           C    +GCCKD  ++A G     C+
Sbjct: 884 CAASLYGCCKDRKTIAFGPHYSGCE 908


>Z78066-2|CAB01524.2|  257|Caenorhabditis elegans Hypothetical
           protein W06A7.4 protein.
          Length = 257

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 259 LIIL*NGRILY-FVNVAATSMVAVKMALVLPMDKLHKHANN 378
           +I+L  G  +Y F+ V     VA     VLPM+KLH+H  N
Sbjct: 47  IILLIVGSSIYPFIKVNVVGSVASDT--VLPMEKLHQHTQN 85


>Z71186-7|CAM35835.1|  552|Caenorhabditis elegans Hypothetical
           protein F23D12.10 protein.
          Length = 552

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 1   LQSSTGMTANNYNCHRYDFIIWSMPSYCRSDRKCSNNLK 117
           L ++T  +  N     Y  +IW  P  C SD   +N+ K
Sbjct: 90  LTNTTSKSVPNTPFGEYPTMIWEAPKLCTSDNNNNNSCK 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,655,327
Number of Sequences: 27780
Number of extensions: 255023
Number of successful extensions: 601
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)