Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0185
         (675 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.1  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   8.1  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   8.1  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 32  IIIVTGMIS*FGLCLVIA 85
           +I VTG++     C+VIA
Sbjct: 62  VIFVTGLVGNVSTCVVIA 79


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -3

Query: 535 KYAGYFYINHLKTRKKKDLRNQI*TYD-FGIYHK 437
           K+     +N+LKT++ KD       YD  G Y K
Sbjct: 80  KHTANKVVNYLKTKRPKDWERLSAKYDSTGEYKK 113


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -3

Query: 535 KYAGYFYINHLKTRKKKDLRNQI*TYD-FGIYHK 437
           K+     +N+LKT++ KD       YD  G Y K
Sbjct: 80  KHTANKVVNYLKTKRPKDWERLSAKYDSTGEYKK 113


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,878
Number of Sequences: 438
Number of extensions: 3529
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)