Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0183
         (716 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24E23 Cluster: Putative uncharacterized protein; n=1; ...    33   5.3  
UniRef50_Q8I3N9 Cluster: Putative uncharacterized protein PFE112...    33   7.0  

>UniRef50_Q24E23 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 773

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = -1

Query: 203 VTLINTWRWPRNIRFSFTIYDTIF*NYKNITKNYYRQNNLHFS*NKVKNLNSIY 42
           + L+N   +  +I + F ++D+I  N K+I  + YR  + +F  +  K  N +Y
Sbjct: 639 IVLVNVLYYGASINYQFELHDSILTNNKSIVMDIYRMRSRYFD-DSFKTTNYLY 691


>UniRef50_Q8I3N9 Cluster: Putative uncharacterized protein PFE1120w;
            n=2; Eukaryota|Rep: Putative uncharacterized protein
            PFE1120w - Plasmodium falciparum (isolate 3D7)
          Length = 9341

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
 Frame = -1

Query: 425  FIIATHTVAFLLRTRECAMQRKPDSRSLTRHDFFKLHCVPYGIR**RLHMSSFSRKIRVI 246
            +II T TV+ L    +C M++K   +S     FF  +      R   L++  +    +  
Sbjct: 2116 YIILTDTVSNLFSVSKCNMKKK---KSKKNSFFFDNNICILSKRKFDLYIDDYHMNYK-- 2170

Query: 245  SMLPQVYLDLHSFEVTLINTWRWPRNIR-----FSFTIYDTIF*NYKNITKNY 102
            +M PQ++LD+H      IN W   + I+     F F    T+F  + N+  NY
Sbjct: 2171 NMKPQIHLDIH------INKWTNEKIIKISLSNFYFFYSSTLFILFSNVVINY 2217


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,656,313
Number of Sequences: 1657284
Number of extensions: 10301268
Number of successful extensions: 21374
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21364
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)