Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0183
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   1.9  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   2.5  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   5.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.6  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -1

Query: 389 RTRECAM--QRKPDSRSLTRHDFFKLHCV 309
           R R+C +    K  SR   R ++FK+HC+
Sbjct: 62  RLRKCLLVGMSKSGSRYGRRSNWFKIHCL 90


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 25  ELLCTQ*MLFKFFTLFYEKCRL 90
           E LC   M+F  ++  YEKC L
Sbjct: 65  EKLCPDGMVFNDYSSEYEKCDL 86


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = -2

Query: 337 VMIFLNYIACHTESVSKGFICHRFQERF 254
           +++ +     H+ES     +C+ +Q+RF
Sbjct: 272 ILLIMTCSGVHSESQKLVGVCYEYQDRF 299


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 639 CVTIQRLGVSCV 674
           CVT   LG+ CV
Sbjct: 155 CVTFSNLGIQCV 166


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 57  IFYFIL*KMQIILAVVIFCNIFVI 128
           I+YF    + I+L +  FC  F+I
Sbjct: 285 IYYFYC-ALIILLCIYYFCRAFII 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,027
Number of Sequences: 336
Number of extensions: 2969
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)