Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0182
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.4  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   7.4  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   7.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.4  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/37 (24%), Positives = 15/37 (40%)
 Frame = -1

Query: 136 LIYWNSKSDPHGAKGKHQQPEDFHIANPNIRERTHKK 26
           + +W       G K +    +  H   P I+ER  K+
Sbjct: 459 ICFWYVPKSLRGRKDEADYKDKLHKVAPRIKERMMKE 495


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +1

Query: 481 PDIRAGNARRMAPSRFLRF 537
           P+++AG+   ++  RF++F
Sbjct: 437 PELKAGSLEEISVKRFVKF 455


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +1

Query: 481 PDIRAGNARRMAPSRFLRF 537
           P+++AG+   ++  RF++F
Sbjct: 439 PELKAGSLEEISVKRFVKF 457


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 638 SGNGGAVVNILHKTDTVTH 694
           +GNG  ++N LHK     H
Sbjct: 139 NGNGQIMLNSLHKYKPTVH 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,790
Number of Sequences: 336
Number of extensions: 3870
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)