Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0182
(703 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0253 + 22416981-22416993,22417458-22417639,22417965-224181... 87 1e-17
01_06_0807 + 32125987-32126029,32126030-32126208,32126760-321269... 87 1e-17
07_03_1177 - 24574682-24574852,24575047-24575618,24575711-245760... 86 3e-17
02_01_0652 - 4848174-4848194,4849121-4849693,4849816-4849955,485... 36 0.041
09_02_0535 - 10346395-10346705,10347100-10347175,10348931-103490... 32 0.38
08_02_1169 + 24858843-24858993,24859495-24859788,24860303-248603... 32 0.38
12_02_0229 - 15940144-15940451,15940879-15941380,15941594-159417... 32 0.51
04_04_0204 + 23582239-23582338,23582866-23583213,23583357-235834... 31 1.2
02_04_0415 + 22706964-22707072,22707784-22708077,22708304-227084... 31 1.2
07_01_1213 + 11562671-11562729,11563814-11563907,11564465-115645... 29 4.7
02_03_0403 + 18636953-18637004,18637088-18637299,18638852-186389... 29 4.7
07_03_1547 + 27623945-27625612 28 8.3
>03_05_0253 +
22416981-22416993,22417458-22417639,22417965-22418148,
22418241-22418315,22418481-22418590,22419411-22419629,
22419713-22419868,22419996-22420232
Length = 391
Score = 87.4 bits (207), Expect = 1e-17
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = +1
Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFT 441
GAD+IE D++ TKDG L+ HD L TTD+A+R EFA R RT V+ +TGWF DFT
Sbjct: 71 GADFIESDILATKDGHLICFHDVILDATTDIANRTEFANRKRTYEVERQNVTGWFVVDFT 130
Query: 442 LAEIKTLRARER 477
L E+K+LR ++R
Sbjct: 131 LEELKSLRVKQR 142
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +2
Query: 182 PLIIAHRGASGYVPEHTLGSY--ALSKPWELITSNLI 286
P IAHRG++G +PE T +Y A+ + + I S+++
Sbjct: 44 PYNIAHRGSNGEIPEETTAAYLRAIEEGADFIESDIL 80
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 453 KNVTS*RTHTRYQSWQRT*DGTFTIPTFQEIISLAKGLQKSQKRTIGIYPEIKH 614
+ + S R RY + +G + I TF E I +A R +GIYPE+K+
Sbjct: 132 EELKSLRVKQRYNFRDQQYNGKYQIITFDEYILIALYAD----RVVGIYPELKN 181
>01_06_0807 +
32125987-32126029,32126030-32126208,32126760-32126943,
32127714-32127788,32128079-32128188,32128747-32128965,
32129124-32129279,32129759-32129911,32130223-32130349,
32131598-32131728,32131858-32132139
Length = 552
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/74 (54%), Positives = 50/74 (67%)
Frame = +1
Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFT 441
GAD+IE D++ +KDG L+ HD L TTDVASR EF+ R RT V+ TGWF DFT
Sbjct: 80 GADFIETDILASKDGALICFHDVTLDATTDVASRKEFSNRRRTYEVEWFNATGWFVVDFT 139
Query: 442 LAEIKTLRARERIP 483
L E+KTL+ +R P
Sbjct: 140 LEELKTLKVNQRYP 153
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +3
Query: 471 RTHTRYQSWQRT*DGTFTIPTFQEIISLAKGLQKSQKRTIGIYPEIKHSTHFKK 632
+ + RY + +G F+I TF+E IS+A L S RT+GIYPE+K K
Sbjct: 147 KVNQRYPFRDQQYNGKFSIITFEEFISIA--LDAS--RTVGIYPEMKDPVFINK 196
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 182 PLIIAHRGASGYVPEHTLGSY 244
P IAHRG++G +PE T +Y
Sbjct: 53 PYNIAHRGSNGEIPEETAAAY 73
>07_03_1177 -
24574682-24574852,24575047-24575618,24575711-24576068,
24576108-24576152
Length = 381
Score = 85.8 bits (203), Expect = 3e-17
Identities = 41/72 (56%), Positives = 51/72 (70%)
Frame = +1
Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFT 441
GAD+IE D+ TKDG LV HD L TTDVA EFA+R RT V + +TG+F DFT
Sbjct: 79 GADFIEADVTATKDGHLVCFHDTTLDATTDVADHPEFASRRRTLEVQWTNVTGFFITDFT 138
Query: 442 LAEIKTLRARER 477
LAE+KTLR+++R
Sbjct: 139 LAELKTLRSKQR 150
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 471 RTHTRYQSWQRT*DG--TFTIPTFQEIISLAKGLQKSQKRTIGIYPEIKH 614
R+ RY R+ +G + I TF E I A G + R +GIYPEIK+
Sbjct: 146 RSKQRYAFRDRSYNGGESSRIITFDEFIDTAAG---AASRVVGIYPEIKN 192
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 182 PLIIAHRGASGYVPEHTLGSY 244
P IAHRG++G +PE T +Y
Sbjct: 52 PFNIAHRGSNGELPEETAAAY 72
>02_01_0652 -
4848174-4848194,4849121-4849693,4849816-4849955,
4850072-4850359,4850458-4850505,4850605-4851106,
4851217-4851326,4851620-4851916,4852025-4852124
Length = 692
Score = 35.5 bits (78), Expect = 0.041
Identities = 29/92 (31%), Positives = 47/92 (51%)
Frame = +1
Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFT 441
GAD I+ + M+KDGV + +LS +T ++ F T+ T + + +G F+ D T
Sbjct: 384 GADIIDCAVRMSKDGVAFCQPSADLSTSTTAST--SFMTKISTVS-EIQNKSGIFSFDLT 440
Query: 442 LAEIKTLRARERIPDIRAGNARRMAPSRFLRF 537
+EI+TL+ P +AG R A +F
Sbjct: 441 WSEIQTLKPDLLGPYTQAGLKRNPAAKNAGKF 472
Score = 34.3 bits (75), Expect = 0.095
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 283 DLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFTLAEI 453
DL ++ DG+ + L +T +A F R +T V+G I GWF DFT E+
Sbjct: 73 DLQLSSDGLGFCKTGLTLENSTLIAEA--FPKRAKTYKVNGEEIHGWFALDFTADEL 127
>09_02_0535 -
10346395-10346705,10347100-10347175,10348931-10349070,
10349294-10349578,10349677-10349718,10350963-10351461,
10351557-10351723,10352128-10352412,10352695-10352836
Length = 648
Score = 32.3 bits (70), Expect = 0.38
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = +1
Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFT 441
GAD I+ + MTKDG+ + +L TTDV + +F + + + + G FT + T
Sbjct: 408 GADVIDCSIQMTKDGIPICMSSIDLLATTDV-QQSKFCSL-LSVIPEIQSKKGIFTFNLT 465
Query: 442 LAEIKTLRARERIP---DIRAGNARRMAPSRFLRFKKSLVW 555
+I LR + P + N R +FL+ + L +
Sbjct: 466 WDDINILRPKISSPLSDYVMLRNPRYTNHGKFLKLSEFLTY 506
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 283 DLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFTLAEIKTL 462
D+ +TKDGV + D + TD+ + + ++G+ TGW D+ +A ++ +
Sbjct: 84 DVQLTKDGVGICLRDLLMQNCTDITE--IYPEGMKAYLINGAQKTGWLPVDYNMASLRNV 141
>08_02_1169 +
24858843-24858993,24859495-24859788,24860303-24860349,
24860779-24861277,24862233-24862274,24862376-24862666,
24862793-24862932,24863278-24863770,24864105-24864484
Length = 778
Score = 32.3 bits (70), Expect = 0.38
Identities = 26/73 (35%), Positives = 35/73 (47%)
Frame = +1
Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFT 441
GAD I+ + MT DGV V L TT+V R F+ R + D G FT + T
Sbjct: 374 GADVIDCSIQMTSDGVPVCMSSINLFETTNV-QRTPFSNR-ASIFKDIQPTPGIFTFNLT 431
Query: 442 LAEIKTLRARERI 480
A+I + R +I
Sbjct: 432 WADISSSDLRPKI 444
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +1
Query: 256 TMGADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTED 435
T G + ++ +TKDGV + D + T ++ + + V+G GWF D
Sbjct: 81 TSGDTVLWCNVQLTKDGVGICLRDLLMDNCTSISQA--YRAGKKAYLVNGEEKKGWFPID 138
Query: 436 FTLAEIKTL 462
+T++ ++++
Sbjct: 139 YTMSSLQSV 147
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 137 NLDFNSEFLNSDFCSPLIIAHRGASGYVPEHT 232
NL+ +S+ +D SPLII+H GASG P+ T
Sbjct: 335 NLNVSSK---TDHGSPLIISHNGASGDYPDCT 363
>12_02_0229 -
15940144-15940451,15940879-15941380,15941594-15941727,
15941954-15942238,15942965-15943463,15944064-15944350,
15944702-15944801
Length = 704
Score = 31.9 bits (69), Expect = 0.51
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = +1
Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFT 441
GAD I+ + MTKDG+ + L +TDV + +F++ + + G FT + T
Sbjct: 325 GADVIDCSIEMTKDGIPICMSSINLYDSTDVQNS-KFSSL-ASVVPEIQTKPGIFTFNLT 382
Query: 442 LAEIKTLRAR 471
EI TLR +
Sbjct: 383 WEEISTLRPK 392
>04_04_0204 +
23582239-23582338,23582866-23583213,23583357-23583472,
23583565-23584003,23584165-23584203,23584282-23584569,
23584667-23584806,23585080-23585563,23585828-23586090
Length = 738
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFT 441
GAD I+ + +TKDG+ + L T VA + +FA++ D ++ G FT + T
Sbjct: 377 GADVIDCPVQLTKDGIPICMSSINLMDDTTVA-KSQFASQTAV-IKDIESVLGVFTFNLT 434
Query: 442 LAEI-KTLRARERIP 483
+I K LR + P
Sbjct: 435 WDDIVKNLRPKISTP 449
>02_04_0415 +
22706964-22707072,22707784-22708077,22708304-22708416,
22708504-22709002,22709106-22709144,22709228-22709515,
22709766-22709905,22710468-22710960,22711082-22711356
Length = 749
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 92 SFSTVGITFGIPV--NENLDFNSEFLNS--DFCSPLIIAHRGASGYVPEHT 232
+FS G+ P+ +E + S NS D PLII+H GASG P+ T
Sbjct: 320 AFSVDGVLTDFPITPSEAIGCFSNLNNSKTDNAKPLIISHNGASGDYPDCT 370
>07_01_1213 +
11562671-11562729,11563814-11563907,11564465-11564530,
11564793-11564894,11564992-11565141,11565241-11565384
Length = 204
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 271 YIEPDLVMTKDGVLVARHDNELSLTTDVASRI 366
YIE L M +DGVLV+ D LS+T D +I
Sbjct: 44 YIEVGLCMLQDGVLVSDSD-RLSMTRDNVKKI 74
>02_03_0403 +
18636953-18637004,18637088-18637299,18638852-18638911,
18639078-18639158,18639273-18639473,18639575-18639670,
18639780-18639976,18640067-18640295
Length = 375
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 268 DYIEPDLVMTKDGVLVARHDN 330
DY+E D+ +TKDG V HDN
Sbjct: 81 DYVEFDVQVTKDGCPVIFHDN 101
>07_03_1547 + 27623945-27625612
Length = 555
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 59 SNMKIFGLLVLSFSTVGITFGIPVN 133
S + FGLL+LSF +VG F PV+
Sbjct: 67 SMRRFFGLLLLSFVSVGTLFVAPVS 91
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,856,851
Number of Sequences: 37544
Number of extensions: 411490
Number of successful extensions: 988
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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