Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0182
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125960-1|AAD14735.1|  356|Caenorhabditis elegans Hypothetical ...    48   9e-06
Z78198-2|CAB01567.1|  296|Caenorhabditis elegans Hypothetical pr...    32   0.35 
U49941-2|AAB53873.1|  757|Caenorhabditis elegans Hypothetical pr...    31   0.80 
Z47812-12|CAE48507.1|  719|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z47812-11|CAA87796.1|  796|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z47811-6|CAE48505.1|  719|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z47811-5|CAA87788.1|  796|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z81066-3|CAI46608.1|  363|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U97193-7|AAK68163.1|  299|Caenorhabditis elegans Yeast sir relat...    29   2.4  
Z78540-4|CAB01734.2|  624|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL031627-16|CAA20968.1|  262|Caenorhabditis elegans Hypothetical...    27   9.8  

>AF125960-1|AAD14735.1|  356|Caenorhabditis elegans Hypothetical
           protein T12B3.3 protein.
          Length = 356

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 31/76 (40%), Positives = 41/76 (53%)
 Frame = +1

Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFT 441
           GAD IE D+ +TKDG  V  HD++L  TTD+   I   TR      D SA T   T    
Sbjct: 90  GADLIEFDVALTKDGKAVLMHDDDLDRTTDMKGPIRDKTRAELDRCDISA-TFKRTAPGD 148

Query: 442 LAEIKTLRARERIPDI 489
              + T+ +RER+PD+
Sbjct: 149 HCRLATV-SRERVPDM 163


>Z78198-2|CAB01567.1|  296|Caenorhabditis elegans Hypothetical
           protein F55C5.2 protein.
          Length = 296

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +1

Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITG 420
           G D +E D+ M+ DGV +  HD+    T +   ++E +T  + + V  + + G
Sbjct: 58  GCDLVEFDIHMSSDGVPLLMHDDTTERTGNAKLKVEHSTWQQLEAVVLNPVNG 110


>U49941-2|AAB53873.1|  757|Caenorhabditis elegans Hypothetical
           protein K10B3.6a protein.
          Length = 757

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = +1

Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFT 441
           GADY+E D+ +TKD   V  HD    +   VA R +  +   T   +  ++     +D T
Sbjct: 444 GADYVEMDVQLTKDLKTVVYHD--FHVLVAVAGR-DSPSSTPTAAGENKSLHEIAIKDLT 500

Query: 442 LAEIKTL 462
           LA++  L
Sbjct: 501 LAQLNLL 507


>Z47812-12|CAE48507.1|  719|Caenorhabditis elegans Hypothetical
           protein T05H10.7b protein.
          Length = 719

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 262 GADYIEPDLVMTKDGVLVARHD 327
           GADY+E D+ +TKD + V  HD
Sbjct: 357 GADYVEFDVQLTKDRIAVIYHD 378


>Z47812-11|CAA87796.1|  796|Caenorhabditis elegans Hypothetical
           protein T05H10.7a protein.
          Length = 796

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 262 GADYIEPDLVMTKDGVLVARHD 327
           GADY+E D+ +TKD + V  HD
Sbjct: 434 GADYVEFDVQLTKDRIAVIYHD 455


>Z47811-6|CAE48505.1|  719|Caenorhabditis elegans Hypothetical
           protein T05H10.7b protein.
          Length = 719

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 262 GADYIEPDLVMTKDGVLVARHD 327
           GADY+E D+ +TKD + V  HD
Sbjct: 357 GADYVEFDVQLTKDRIAVIYHD 378


>Z47811-5|CAA87788.1|  796|Caenorhabditis elegans Hypothetical
           protein T05H10.7a protein.
          Length = 796

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 262 GADYIEPDLVMTKDGVLVARHD 327
           GADY+E D+ +TKD + V  HD
Sbjct: 434 GADYVEFDVQLTKDRIAVIYHD 455


>Z81066-3|CAI46608.1|  363|Caenorhabditis elegans Hypothetical
           protein F17B5.6 protein.
          Length = 363

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = -2

Query: 438 KIFREPTGDSRSVHCLSPVACSEFNTTCDVGC-QTQFVVMSGHKYPVFRHY 289
           K+   P   S+S   ++PVAC  +  T  + C Q++F+V+ G  +  ++++
Sbjct: 120 KVASMPIEISKSARFVAPVACCYYQYTGLLTCDQSKFLVIDGMHFQSYKYF 170


>U97193-7|AAK68163.1|  299|Caenorhabditis elegans Yeast sir related
           protein 2.4 protein.
          Length = 299

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -1

Query: 100 AKGKHQQPEDFHIANPNIRERTHKKILSLN 11
           A+GKH +  DF +A P +   +HK IL+L+
Sbjct: 86  AEGKHAEGVDFQVARPGV---SHKSILALH 112


>Z78540-4|CAB01734.2|  624|Caenorhabditis elegans Hypothetical
           protein C33G3.6 protein.
          Length = 624

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +3

Query: 327 QRTEFDNRRRKSY*IRYTQPDSNSGRICYHRLVHGRFYTGRNKNVTS*RTHTRYQSW 497
           +R + +   +KSY   Y Q   NS +  Y    +G  YT RN++V + +++ + Q W
Sbjct: 291 ERQQLEPEMQKSYNNDYRQSSINSHQDKYENSSNGINYTDRNQDVYNNKSYGQ-QEW 346


>AL031627-16|CAA20968.1|  262|Caenorhabditis elegans Hypothetical
           protein Y102A5C.27 protein.
          Length = 262

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 244 CSQ*TMGADYIEPDLVMTKDGVLVARHDNELSLTTDVA 357
           CSQ  +   Y+      TK  ++    D E SLTTD +
Sbjct: 81  CSQKKIECSYLTSGKCPTKPEIVAVNADGEFSLTTDTS 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,851,829
Number of Sequences: 27780
Number of extensions: 359689
Number of successful extensions: 862
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)