Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0182
(703 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g08030.1 68418.m00934 glycerophosphoryl diester phosphodieste... 89 3e-18
At1g74210.1 68414.m08595 glycerophosphoryl diester phosphodieste... 81 7e-16
At1g66970.1 68414.m07615 glycerophosphoryl diester phosphodieste... 38 0.005
At4g26690.1 68417.m03846 glycerophosphoryl diester phosphodieste... 37 0.011
At5g58050.1 68418.m07265 glycerophosphoryl diester phosphodieste... 36 0.026
At1g66980.1 68414.m07616 protein kinase family protein / glycero... 34 0.10
At5g58170.1 68418.m07281 glycerophosphoryl diester phosphodieste... 33 0.14
At5g55480.1 68418.m06910 glycerophosphoryl diester phosphodieste... 32 0.42
At2g03630.1 68415.m00323 hypothetical protein 30 1.3
At5g25040.1 68418.m02967 integral membrane transporter family pr... 28 5.2
At1g08000.2 68414.m00873 zinc finger (GATA type) family protein ... 28 5.2
At1g08000.1 68414.m00872 zinc finger (GATA type) family protein ... 28 5.2
At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG ... 28 6.9
At2g31290.1 68415.m03820 expressed protein 28 6.9
At1g20410.1 68414.m02545 expressed protein 28 6.9
At1g08010.1 68414.m00874 zinc finger (GATA type) family protein ... 27 9.1
>At5g08030.1 68418.m00934 glycerophosphoryl diester
phosphodiesterase family protein similar to
glycerophosphodiester phosphodiesterase [Borrelia
hermsii] GI:1399038; contains Pfam profile PF03009:
Glycerophosphoryl diester phosphodiesterase family
Length = 372
Score = 88.6 bits (210), Expect = 3e-18
Identities = 42/74 (56%), Positives = 52/74 (70%)
Frame = +1
Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFT 441
GAD+IE D++ +KDGVL+ HD L TTDVA EFA R RT V G +TG+FT DFT
Sbjct: 71 GADFIETDILSSKDGVLICHHDVNLDDTTDVADHKEFADRKRTYEVQGMNMTGFFTVDFT 130
Query: 442 LAEIKTLRARERIP 483
L E+KTL A++R P
Sbjct: 131 LKELKTLGAKQRYP 144
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +3
Query: 483 RYQSWQRT*DGTFTIPTFQEIISLAKGLQKSQKRTIGIYPEIKH 614
RY + +G F I TF E IS+A R +GIYPEIK+
Sbjct: 142 RYPFRDQQYNGKFPIITFDEYISIAL----DAPRVVGIYPEIKN 181
>At1g74210.1 68414.m08595 glycerophosphoryl diester
phosphodiesterase family protein low similarity to
glycerophosphodiester phosphodiesterase [Borrelia
hermsii] GI:1399038; contains Pfam profile PF03009:
Glycerophosphoryl diester phosphodiesterase family
Length = 392
Score = 81.0 bits (191), Expect = 7e-16
Identities = 40/72 (55%), Positives = 50/72 (69%)
Frame = +1
Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFT 441
G D+IE D++ +KDGVL+ HD L TT+VAS EFA R RT V G ITG+FT DFT
Sbjct: 71 GTDFIETDILSSKDGVLICFHDCILDETTNVASHKEFADRKRTYDVQGFNITGFFTFDFT 130
Query: 442 LAEIKTLRARER 477
L E+K LR ++R
Sbjct: 131 LKELKQLRIKQR 142
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 453 KNVTS*RTHTRYQSWQRT*DGTFTIPTFQEIISLAKGLQKSQKRTIGIYPEIKH 614
K + R RY + +G + I TF+E +++A+ R +GIYPEIK+
Sbjct: 132 KELKQLRIKQRYAFRDQQYNGMYPIITFEEFLTIAR----DAPRVVGIYPEIKN 181
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +2
Query: 182 PLIIAHRGASGYVPEHTLGSY--ALSKPWELITSNLI 286
P IAHRG++G +PE T +Y A+ + + I ++++
Sbjct: 44 PYNIAHRGSNGEIPEETTAAYLKAIEEGTDFIETDIL 80
>At1g66970.1 68414.m07615 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family
Length = 763
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +1
Query: 283 DLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFTLAEIK 456
DL +TKDG+ + D L+ + + R+ + R ++ +V+G GWF DF+L E++
Sbjct: 86 DLQLTKDGLGICFPDLNLANASTI-DRV-YPNREKSYSVNGVTTKGWFPNDFSLTELQ 141
>At4g26690.1 68417.m03846 glycerophosphoryl diester
phosphodiesterase family protein weak similarity to
glycerophosphodiester phosphodiesterase [Borrelia
hermsii] GI:1399038; contains Pfam profile PF03009:
Glycerophosphoryl diester phosphodiesterase family
Length = 759
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +1
Query: 283 DLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFTLAEIK 456
D+ +TKD + + D L++ + + TR ++ V+G +GWFT DF+L ++K
Sbjct: 80 DVQLTKDALGICFPD--LTMRNSSSIEAVYPTRQKSYPVNGVPTSGWFTIDFSLKDLK 135
>At5g58050.1 68418.m07265 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family;
similar to Glycerophosphoryl diester phosphodiesterase
precursor (Glycerophosphodiester phosphodiesterase)
(Surface-exposed lipoprotein D) (Protein D)
(ImmunoglobulinD-binding protein) (IGD-binding protein)
(SP:Q06282) {Haemophilus influenzae}
Length = 753
Score = 35.9 bits (79), Expect = 0.026
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = +1
Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFT 441
GAD I+ + M+KDG+ +LS +T +R F +R T + G F+ D T
Sbjct: 382 GADIIDCSVQMSKDGIAFCHDAADLSAST--TARTTFMSR-ATSVPEIQPTNGIFSFDLT 438
Query: 442 LAEIKTLRARERIPDIRAGNARRMA 516
AEI++++ + P G R A
Sbjct: 439 WAEIQSVKPQIENPFTATGFQRNPA 463
Score = 34.7 bits (76), Expect = 0.060
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +1
Query: 283 DLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDF 438
+L MTKDGV + D L T ++S F +T V+G + GWF D+
Sbjct: 77 NLQMTKDGVGLCLSDIRLDNATTISS--VFPKAQKTYKVNGQDLKGWFVIDY 126
>At1g66980.1 68414.m07616 protein kinase family protein /
glycerophosphoryl diester phosphodiesterase family
protein similar to leaf rust resistance kinase Lr10
GI:1680685 from [Triticum aestivum]; contains Pfam
profiles PF03009: Glycerophosphoryl diester
phosphodiesterase family, PF00069: Protein kinase domain
Length = 1109
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +1
Query: 283 DLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFTLAEIK 456
D+ +TKDG + D L+L S + R ++ V+G GWF DF+L E++
Sbjct: 87 DVQLTKDGHGICFPD--LNLANASNSEEVYPNRQKSYPVNGVTTKGWFPIDFSLTELQ 142
>At5g58170.1 68418.m07281 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family;
similar to Glycerophosphoryl diester phosphodiesterase
precursor (Glycerophosphodiester phosphodiesterase)
(Surface-exposed lipoprotein D) (Protein D)
(ImmunoglobulinD-binding protein) (IGD-binding protein)
(SP:Q06282) {Haemophilus influenzae}
Length = 750
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +1
Query: 283 DLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDF 438
+L MTKDGV + D L T ++S F +T V+G + GWF D+
Sbjct: 77 NLQMTKDGVGLCLSDIILDNATTISS--VFPKAQKTYKVNGQDLKGWFVLDY 126
Score = 33.5 bits (73), Expect = 0.14
Identities = 26/85 (30%), Positives = 39/85 (45%)
Frame = +1
Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTVDGSAITGWFTEDFT 441
GAD I+ + M+KDG+ HD LT + F +R T + G F+ D T
Sbjct: 382 GADVIDCSVQMSKDGIAFC-HD-AADLTASTTAMTIFMSR-ATSVPEIQPTNGIFSFDLT 438
Query: 442 LAEIKTLRARERIPDIRAGNARRMA 516
AEI++++ + P G R A
Sbjct: 439 WAEIQSVKPQIENPFTATGFQRNPA 463
>At5g55480.1 68418.m06910 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam PF03009 :
Glycerophosphoryl diester phosphodiesterase family;
similar to Glycerophosphoryl diester phosphodiesterase
precursor (Glycerophosphodiester phosphodiesterase)
(Surface-exposed lipoprotein D) (Protein D)
(ImmunoglobulinD-binding protein) (IGD-binding protein)
(SP:Q06282) {Haemophilus influenzae}
Length = 766
Score = 31.9 bits (69), Expect = 0.42
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 262 GADYIEPDLVMTKDGVLVARHDNELSLTTDVASRIEFATRNRTQTV-DGSAITGWFTEDF 438
GAD I+ L M+ DG+ L +T+V ++ RNR+ TV + ++ G ++
Sbjct: 392 GADVIDCSLQMSSDGIPFCLSSINLGESTNV---VQSPFRNRSTTVPEIGSLPGIYSFSL 448
Query: 439 TLAEIKTLR 465
+EI+TLR
Sbjct: 449 AWSEIQTLR 457
>At2g03630.1 68415.m00323 hypothetical protein
Length = 252
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 192 MISGEQKSEFKNSELKSRFS--FTGIPKVIPT-VLKESTNSPKIFILLTQISVREHTKKY 22
+I+ E S +S S S + PK +P VLKES N P+I Q+ R++ KY
Sbjct: 46 IINSESHSRLSSSSSSSSSSSSYLSPPKDLPEEVLKESLNDPEISSPPVQVMDRDNNGKY 105
>At5g25040.1 68418.m02967 integral membrane transporter family
protein similar to biopterin transporter (GI:3377706)
[Leishmania mexicana]; contains Pfam PF03092: BT1
family; contains TIGRFAMS TIGR00788: folate/biopterin
transporter; Interpro IPR001991/ PR00173
Sodium:dicarboxylater symporter family
Length = 492
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 26 FFVCSLTDIWVSNMKIFGLLVLSF---STVGITFGIPVNENLDFNSEFLNS 169
FF+ + V + +FGLL +F S VG+ F P F F N+
Sbjct: 196 FFMSGILVHLVGSKGVFGLLTFTFALVSVVGVLFSEPRVHGFSFKQNFTNA 246
>At1g08000.2 68414.m00873 zinc finger (GATA type) family protein
similar to PIR:T05288 from [Arabidopsis thaliana]
Length = 308
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 146 NQGSHLLEFQK*SPRC*RKAPTARRFSYC*PKYP*ENTQKNTVTK 12
N GS L F R R+ PT R SY P P ++T +VT+
Sbjct: 138 NSGSQRLAFPVKGMRSKRRRPTTVRLSYLFPFEPRKSTPGESVTE 182
>At1g08000.1 68414.m00872 zinc finger (GATA type) family protein
similar to PIR:T05288 from [Arabidopsis thaliana]
Length = 308
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 146 NQGSHLLEFQK*SPRC*RKAPTARRFSYC*PKYP*ENTQKNTVTK 12
N GS L F R R+ PT R SY P P ++T +VT+
Sbjct: 138 NSGSQRLAFPVKGMRSKRRRPTTVRLSYLFPFEPRKSTPGESVTE 182
>At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG
binding domain-containing protein contains Pfam profiles
PF00628: PHD-finger (2 copies), PF01429: Methyl-CpG
binding domain
Length = 2176
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -2
Query: 171 SEFKNSELKSRFSFTGIPKVIPTVLKE 91
SE+KN++++ F + KV P++LKE
Sbjct: 1431 SEWKNAKMRQEFLTAKLAKVEPSILKE 1457
>At2g31290.1 68415.m03820 expressed protein
Length = 415
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 525 IPTFQEIISLAKGLQKSQKRTIGIYPEIKHSTHFKKLGL 641
I +++ L +G ++S+KR++G+ E+ T +KKL +
Sbjct: 237 ISPYEDHGDLVEGSKESEKRSVGLVHELLSLTLWKKLSI 275
>At1g20410.1 68414.m02545 expressed protein
Length = 504
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 413 SPVGSRKILHWPK*KRYELENAYQISELATHVGWHLHD 526
SP+ KI+HW K ++ + + Y + L T G ++ +
Sbjct: 431 SPLDREKIIHWMKVEKIKGHSHYFLLHLCTQAGTYIKE 468
>At1g08010.1 68414.m00874 zinc finger (GATA type) family protein
similar to PIR:T05288 from [Arabidopsis thaliana]
Length = 303
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = -3
Query: 146 NQGSHLLEFQK*SPRC*RKAPTARRFSYC*PKYP*ENTQKNTVTK 12
N GS L F R RK PT R SY P P +K+T K
Sbjct: 137 NNGSQRLAFPVKGMRSKRKRPTTLRLSYLFPSEP-RKPEKSTPGK 180
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,978,260
Number of Sequences: 28952
Number of extensions: 337310
Number of successful extensions: 891
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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