Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0181
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.7  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.7  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 57  KNKENLYVYVFIKVNILKVIT 119
           K ++NLY  +   +N+L V+T
Sbjct: 94  KIRKNLYYLLLFVINVLYVLT 114


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -2

Query: 577 FSIIRWKRRKKTLYYHLKD-TFNKLL*RRYFEWV 479
           +S++R KR  ++ YY L + T+N    R+Y+ W+
Sbjct: 27  YSLLRVKRMMRSWYYLLTNLTYNNTN-RKYY-WL 58


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = -1

Query: 320 VYNWLYSS*DRSKGVRYKNRQITATP 243
           +++WL +    S+G +++NR+   TP
Sbjct: 107 LHSWLGTGLLTSRGPKWQNRRKILTP 132


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 203 GWIDLY*GFLFQ 168
           GW+DLY G   Q
Sbjct: 71  GWLDLYLGITIQ 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,682
Number of Sequences: 336
Number of extensions: 2853
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)