Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0180
         (592 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061327-1|AAL28875.1|  719|Drosophila melanogaster LD24749p pro...    42   6e-04
AJ243916-1|CAB51032.1|  719|Drosophila melanogaster DOMINA prote...    42   6e-04
AJ243814-1|CAB51073.1|  719|Drosophila melanogaster DOMINA prote...    42   6e-04
AF264033-1|AAF91395.1|  719|Drosophila melanogaster winged-helix...    42   6e-04
AE014297-1143|AAF54525.1|  719|Drosophila melanogaster CG4029-PA...    42   6e-04
AB028890-1|BAA94598.1|  719|Drosophila melanogaster Winged-helix...    42   6e-04
BT025198-1|ABF17889.1|  456|Drosophila melanogaster FI01123p pro...    29   3.6  
AY084204-1|AAL89942.1|  456|Drosophila melanogaster SD02951p pro...    29   3.6  
AE013599-3490|AAF46917.1|  456|Drosophila melanogaster CG3668-PA...    29   3.6  

>AY061327-1|AAL28875.1|  719|Drosophila melanogaster LD24749p
           protein.
          Length = 719

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
 Frame = +3

Query: 45  MCEIQDFSIEQKDIYSNKYSWCS--DMDLYITDSLQDMLDIDIKNEIATDL-SSISDFQD 215
           M E++D+S    + + +KY+  +   +D Y++DS+Q+ML++DI+ EIA  + SS SD   
Sbjct: 1   MFELEDYSSGIHEGFFSKYADAAGPSLDFYVSDSMQEMLNVDIRAEIANVVGSSSSDLTS 60

Query: 216 S 218
           S
Sbjct: 61  S 61


>AJ243916-1|CAB51032.1|  719|Drosophila melanogaster DOMINA protein
           (WHN-homologue) protein.
          Length = 719

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
 Frame = +3

Query: 45  MCEIQDFSIEQKDIYSNKYSWCS--DMDLYITDSLQDMLDIDIKNEIATDL-SSISDFQD 215
           M E++D+S    + + +KY+  +   +D Y++DS+Q+ML++DI+ EIA  + SS SD   
Sbjct: 1   MFELEDYSSGIHEGFFSKYADAAGPSLDFYVSDSMQEMLNVDIRAEIANVVGSSSSDLTS 60

Query: 216 S 218
           S
Sbjct: 61  S 61


>AJ243814-1|CAB51073.1|  719|Drosophila melanogaster DOMINA protein
           protein.
          Length = 719

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
 Frame = +3

Query: 45  MCEIQDFSIEQKDIYSNKYSWCS--DMDLYITDSLQDMLDIDIKNEIATDL-SSISDFQD 215
           M E++D+S    + + +KY+  +   +D Y++DS+Q+ML++DI+ EIA  + SS SD   
Sbjct: 1   MFELEDYSSGIHEGFFSKYADAAGPSLDFYVSDSMQEMLNVDIRAEIANVVGSSSSDLTS 60

Query: 216 S 218
           S
Sbjct: 61  S 61


>AF264033-1|AAF91395.1|  719|Drosophila melanogaster winged-helix
           protein jumeaux protein.
          Length = 719

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
 Frame = +3

Query: 45  MCEIQDFSIEQKDIYSNKYSWCS--DMDLYITDSLQDMLDIDIKNEIATDL-SSISDFQD 215
           M E++D+S    + + +KY+  +   +D Y++DS+Q+ML++DI+ EIA  + SS SD   
Sbjct: 1   MFELEDYSSGIHEGFFSKYADAAGPSLDFYVSDSMQEMLNVDIRAEIANVVGSSSSDLTS 60

Query: 216 S 218
           S
Sbjct: 61  S 61


>AE014297-1143|AAF54525.1|  719|Drosophila melanogaster CG4029-PA
           protein.
          Length = 719

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
 Frame = +3

Query: 45  MCEIQDFSIEQKDIYSNKYSWCS--DMDLYITDSLQDMLDIDIKNEIATDL-SSISDFQD 215
           M E++D+S    + + +KY+  +   +D Y++DS+Q+ML++DI+ EIA  + SS SD   
Sbjct: 1   MFELEDYSSGIHEGFFSKYADAAGPSLDFYVSDSMQEMLNVDIRAEIANVVGSSSSDLTS 60

Query: 216 S 218
           S
Sbjct: 61  S 61


>AB028890-1|BAA94598.1|  719|Drosophila melanogaster Winged-helix
           nude transcriptionfactor protein.
          Length = 719

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
 Frame = +3

Query: 45  MCEIQDFSIEQKDIYSNKYSWCS--DMDLYITDSLQDMLDIDIKNEIATDL-SSISDFQD 215
           M E++D+S    + + +KY+  +   +D Y++DS+Q+ML++DI+ EIA  + SS SD   
Sbjct: 1   MFELEDYSSGIHEGFFSKYADAAGPSLDFYVSDSMQEMLNVDIRAEIANVVGSSSSDLTS 60

Query: 216 S 218
           S
Sbjct: 61  S 61


>BT025198-1|ABF17889.1|  456|Drosophila melanogaster FI01123p
           protein.
          Length = 456

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +3

Query: 135 DSLQDMLDIDIKNEIATDLSSISDFQDSFGTNFSDMPP 248
           DS +D +D++  NE   + S ISD  DS  TN  D PP
Sbjct: 362 DSCEDKIDVESGNE--QEDSHISDSVDSACTNRLDAPP 397


>AY084204-1|AAL89942.1|  456|Drosophila melanogaster SD02951p
           protein.
          Length = 456

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +3

Query: 135 DSLQDMLDIDIKNEIATDLSSISDFQDSFGTNFSDMPP 248
           DS +D +D++  NE   + S ISD  DS  TN  D PP
Sbjct: 362 DSCEDKIDVESGNE--QEDSHISDSVDSACTNRLDAPP 397


>AE013599-3490|AAF46917.1|  456|Drosophila melanogaster CG3668-PA
           protein.
          Length = 456

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +3

Query: 135 DSLQDMLDIDIKNEIATDLSSISDFQDSFGTNFSDMPP 248
           DS +D +D++  NE   + S ISD  DS  TN  D PP
Sbjct: 362 DSCEDKIDVESGNE--QEDSHISDSVDSACTNRLDAPP 397


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,629,978
Number of Sequences: 53049
Number of extensions: 498070
Number of successful extensions: 1714
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1714
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)