BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0179
(611 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q93104 Cluster: Enhancer of rudimentary homolog; n=8; E... 115 1e-24
UniRef50_Q24337 Cluster: Protein enhancer of rudimentary; n=33; ... 105 6e-22
UniRef50_P84090 Cluster: Enhancer of rudimentary homolog; n=12; ... 96 7e-19
UniRef50_Q96319 Cluster: Enhancer of rudimentary homolog; n=26; ... 61 2e-08
UniRef50_UPI0000F31727 Cluster: UPI0000F31727 related cluster; n... 60 5e-08
UniRef50_A2Y411 Cluster: Putative uncharacterized protein; n=1; ... 57 4e-07
UniRef50_Q20057 Cluster: Putative uncharacterized protein; n=2; ... 56 7e-07
UniRef50_A3FQA4 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_A5KDS9 Cluster: Enhancer of rudimentary domain containi... 46 0.001
UniRef50_Q4Z5Z6 Cluster: Putative uncharacterized protein; n=1; ... 42 0.012
UniRef50_A5BQS2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.25
UniRef50_Q4XLG6 Cluster: Pc-fam-4 protein, putative; n=3; Plasmo... 36 0.76
UniRef50_A7RGJ0 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.3
UniRef50_Q970N2 Cluster: Putative uncharacterized protein ST1566... 33 5.3
>UniRef50_Q93104 Cluster: Enhancer of rudimentary homolog; n=8;
Eumetazoa|Rep: Enhancer of rudimentary homolog - Aedes
aegypti (Yellowfever mosquito)
Length = 103
Score = 115 bits (276), Expect = 1e-24
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +2
Query: 233 EKAKP*YTTITYDISQLFDFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAG 412
++ P TITYDISQLFDFVDQLADLSCLVYQKSTNTYAPYNK+WIKEKIYVLLRQAAG
Sbjct: 41 KRRNPNTPTITYDISQLFDFVDQLADLSCLVYQKSTNTYAPYNKEWIKEKIYVLLRQAAG 100
Query: 413 QSD 421
+D
Sbjct: 101 TTD 103
Score = 103 bits (248), Expect = 3e-21
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +3
Query: 114 MSHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTP 257
MSHTILLVQPG PETRTYSDYESVN+CMEGVCKIYEEHLKRRNPNTP
Sbjct: 1 MSHTILLVQPGRNPETRTYSDYESVNECMEGVCKIYEEHLKRRNPNTP 48
>UniRef50_Q24337 Cluster: Protein enhancer of rudimentary; n=33;
Eukaryota|Rep: Protein enhancer of rudimentary -
Drosophila melanogaster (Fruit fly)
Length = 104
Score = 105 bits (253), Expect = 6e-22
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +2
Query: 233 EKAKP*YTTITYDISQLFDFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAG 412
++ P TITYDISQLFDF+D + D+SC+VYQKSTNTYAPYNKDWIKEKIYVLLRQAA
Sbjct: 41 KRRNPNTPTITYDISQLFDFIDTMVDISCMVYQKSTNTYAPYNKDWIKEKIYVLLRQAAF 100
Query: 413 QSD 421
S+
Sbjct: 101 SSN 103
Score = 104 bits (249), Expect = 2e-21
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +3
Query: 114 MSHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTP 257
MSHTILLVQPG RPETRTY DYESVN+CMEGVCKIYEEHLKRRNPNTP
Sbjct: 1 MSHTILLVQPGARPETRTYCDYESVNECMEGVCKIYEEHLKRRNPNTP 48
>UniRef50_P84090 Cluster: Enhancer of rudimentary homolog; n=12;
Tetrapoda|Rep: Enhancer of rudimentary homolog - Homo
sapiens (Human)
Length = 104
Score = 95.9 bits (228), Expect = 7e-19
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = +2
Query: 233 EKAKP*YTTITYDISQLFDFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAG 412
++ P +ITYDISQLFDF+D LADLSCLVY+ T TY PYNKDWIKEKIYVLLR+ A
Sbjct: 41 KRMNPNSPSITYDISQLFDFIDDLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQAQ 100
Query: 413 QS 418
Q+
Sbjct: 101 QA 102
Score = 93.9 bits (223), Expect = 3e-18
Identities = 40/48 (83%), Positives = 44/48 (91%)
Frame = +3
Query: 114 MSHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTP 257
MSHTILLVQP RPE RTY+DYESVN+CMEGVCK+YEEHLKR NPN+P
Sbjct: 1 MSHTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSP 48
>UniRef50_Q96319 Cluster: Enhancer of rudimentary homolog; n=26;
Magnoliophyta|Rep: Enhancer of rudimentary homolog -
Arabidopsis thaliana (Mouse-ear cress)
Length = 109
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/59 (44%), Positives = 40/59 (67%)
Frame = +2
Query: 233 EKAKP*YTTITYDISQLFDFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAA 409
++ P I+YDI+ L++F+D LADLS LVY S + Y PY++ WIK+K + L++ A
Sbjct: 47 KEINPSLRNISYDIADLYNFIDGLADLSALVYDHSISAYLPYDRQWIKQKAFHHLKRIA 105
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +3
Query: 120 HTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPN 251
HTI+L+Q P TRT+ DY+S+ M+G+C +YE LK NP+
Sbjct: 9 HTIILLQNSPSRATRTFMDYDSIGQAMDGICGLYERKLKEINPS 52
>UniRef50_UPI0000F31727 Cluster: UPI0000F31727 related cluster; n=1;
Bos taurus|Rep: UPI0000F31727 UniRef100 entry - Bos
Taurus
Length = 103
Score = 59.7 bits (138), Expect = 5e-08
Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 119 SHNFAGAARSEARNQDXXXXXXXXXXHGGCV*NI*GTSEKAKP*YTTITYDISQLFDFVD 298
SH+ AG A EAR Q+ G C ++ P +ITYDISQLFDF+D
Sbjct: 2 SHHLAGIAYQEARRQNLRYESVNERMEGVCK-MYEEHLKRMNPNSPSITYDISQLFDFID 60
Query: 299 QLADL--SCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAA 409
LADL SCL+ +K ++T + W K I++ AA
Sbjct: 61 DLADLSFSCLLKKKKSSTDFTQLRQWSKNNIFLWAFPAA 99
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +3
Query: 177 YESVNDCMEGVCKIYEEHLKRRNPNTP 257
YESVN+ MEGVCK+YEEHLKR NPN+P
Sbjct: 20 YESVNERMEGVCKMYEEHLKRMNPNSP 46
>UniRef50_A2Y411 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 376
Score = 56.8 bits (131), Expect = 4e-07
Identities = 21/52 (40%), Positives = 39/52 (75%)
Frame = +2
Query: 260 ITYDISQLFDFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQ 415
+TYDI+ L++F+D L D+S LV+ +S + + PY++ WIK++++ L++ A Q
Sbjct: 325 LTYDINDLYNFIDGLTDISALVFDRSLHAFLPYDRRWIKQEMFQHLKRLAQQ 376
>UniRef50_Q20057 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 113
Score = 56.0 bits (129), Expect = 7e-07
Identities = 20/43 (46%), Positives = 34/43 (79%)
Frame = +3
Query: 117 SHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRN 245
SHT+LL+Q PR ++RT+ DYESV D ++ +CK++E+ L +++
Sbjct: 5 SHTVLLIQTSPRLDSRTWGDYESVTDALDALCKMFEDFLSKKS 47
Score = 54.0 bits (124), Expect = 3e-06
Identities = 17/47 (36%), Positives = 36/47 (76%)
Frame = +2
Query: 260 ITYDISQLFDFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLR 400
+TYD+SQ+++F+D+L+D+S +++ + T Y + WIK+++Y ++R
Sbjct: 51 VTYDVSQVYEFLDKLSDVSMMIFNRETGQYIGRTRAWIKQQVYEMMR 97
>UniRef50_A3FQA4 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 106
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +3
Query: 120 HTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLK 236
HT+LL+Q TR+Y DY+SV+ ++GVC+IYE+ +K
Sbjct: 8 HTLLLIQYSNNISTRSYMDYDSVSQAVDGVCQIYEQSIK 46
Score = 38.7 bits (86), Expect = 0.11
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +2
Query: 260 ITYDISQLFDFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAA 409
+TY I L +++ L D+ L + Y P+++ WI ++IY+ +++ A
Sbjct: 55 VTYSIEDLVKYINSLYDICMLTRDGTNRRYIPHDRKWIIDQIYLKMKRRA 104
>UniRef50_A5KDS9 Cluster: Enhancer of rudimentary domain containing
protein; n=3; Plasmodium|Rep: Enhancer of rudimentary
domain containing protein - Plasmodium vivax
Length = 105
Score = 45.6 bits (103), Expect = 0.001
Identities = 16/52 (30%), Positives = 35/52 (67%)
Frame = +2
Query: 260 ITYDISQLFDFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQ 415
ITY+++ LF ++D + ++ +++ + + TY P++K WIK+K+ ++ GQ
Sbjct: 54 ITYNMNDLFLYIDNIQKMTLMLFHQPSWTYKPHDKKWIKQKLVEHIKDQIGQ 105
Score = 41.5 bits (93), Expect = 0.015
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +3
Query: 117 SHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNP 248
S +LLVQ + E+RT+ +Y S+ + G+C++YE+ +K +P
Sbjct: 6 SDVVLLVQFSRKIESRTFVEYNSLKLALNGICQLYEQAIKENDP 49
>UniRef50_Q4Z5Z6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 86
Score = 41.9 bits (94), Expect = 0.012
Identities = 16/52 (30%), Positives = 33/52 (63%)
Frame = +2
Query: 260 ITYDISQLFDFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQ 415
ITY ++ LF ++D + ++ L++ + T +Y ++K WIK+K+ ++ GQ
Sbjct: 35 ITYSMNDLFVYIDNVQKMTILLFHQPTWSYRLHDKKWIKQKLVEHIKDQIGQ 86
>UniRef50_A5BQS2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 37.5 bits (83), Expect = 0.25
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +2
Query: 260 ITYDISQLFDFVDQLADLSCLVY 328
ITYDI+ L++F+D LAD+S LVY
Sbjct: 67 ITYDIADLYNFIDGLADMSALVY 89
>UniRef50_Q4XLG6 Cluster: Pc-fam-4 protein, putative; n=3;
Plasmodium chabaudi|Rep: Pc-fam-4 protein, putative -
Plasmodium chabaudi
Length = 622
Score = 35.9 bits (79), Expect = 0.76
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Frame = +2
Query: 287 DFVDQLADLSCLVYQKS--TNTYAPYNKD---WIKEKIYVLLRQAAGQSD-*DYKKNSTL 448
D ++ LA +++++S TN Y+ Y++ W+ +K+Y + ++ GQ D +Y +TL
Sbjct: 41 DSINALAAYIIMIFKRSIKTNEYSHYDECLLMWLSDKLYKMHLKSIGQKDTAEYMDGTTL 100
Query: 449 RTPYSVNLKKYIV 487
Y LK Y V
Sbjct: 101 NQAYDNYLKNYKV 113
>UniRef50_A7RGJ0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 176
Score = 33.1 bits (72), Expect = 5.3
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Frame = +3
Query: 174 DYESVNDCMEGVCKIYEEHLKRRNPNTPLSRTI------YHNSSIL 293
D S+ DC+E +C++ H K ++ T +SR + + NSSIL
Sbjct: 53 DQMSLRDCLEAMCQVTSSHSKHKDVQTHVSRALANFAQFHQNSSIL 98
>UniRef50_Q970N2 Cluster: Putative uncharacterized protein ST1566;
n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
protein ST1566 - Sulfolobus tokodaii
Length = 273
Score = 33.1 bits (72), Expect = 5.3
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -1
Query: 563 INLIIKESIREFSKHNNFFLLYYVTQLCIFSSL 465
+NL+I EFSK N FLL VT++ FSS+
Sbjct: 5 LNLMIVNEATEFSKLRNAFLLLTVTEIVYFSSI 37
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,858,125
Number of Sequences: 1657284
Number of extensions: 11386316
Number of successful extensions: 26885
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 26089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26871
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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