Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0178
         (602 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   3.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   4.6  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   8.0  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 375 HYKLILRVGTLCISFNYH*FIL 440
           H+K++L +G  C+++ +  F L
Sbjct: 188 HHKIVLDMGKNCVTYVFDLFYL 209


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 165 FH*IIFNLFSNTYLHIRT 112
           F+ IIF +F + YLH  T
Sbjct: 297 FYFIIFQVFESFYLHKAT 314


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = -2

Query: 550 TVTSSNTHPMLTVIITSL 497
           +V+++NT P+L+  +T+L
Sbjct: 62  SVSNTNTEPLLSEALTNL 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,384
Number of Sequences: 336
Number of extensions: 2678
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)