Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0176
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   3.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   3.4  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   3.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   3.4  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 261 NLKCTEEYKIYPH 299
           N KC +++  YPH
Sbjct: 22  NFKCPDDFGFYPH 34


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 261 NLKCTEEYKIYPH 299
           N KC +++  YPH
Sbjct: 22  NFKCPDDFGFYPH 34


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 179 YVHFQKIQGLFKFPHFFTIRFSNV 250
           YV F  +   FK P + T+R  N+
Sbjct: 35  YVVFSSVSTFFKIPFYSTLRPINL 58


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 179 YVHFQKIQGLFKFPHFFTIRFSNV 250
           YV F  +   FK P + T+R  N+
Sbjct: 35  YVVFSSVSTFFKIPFYSTLRPINL 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,887
Number of Sequences: 336
Number of extensions: 2862
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)