Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0176
         (744 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0753 + 19942397-19942805,19943457-19943866,19944252-19945121     28   6.8  
08_02_1445 + 27149983-27150382,27151203-27151612,27151955-27152818     28   6.8  

>09_04_0753 + 19942397-19942805,19943457-19943866,19944252-19945121
          Length = 562

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -2

Query: 461 NNPKFKIFLFMKSLCIFQSVCIFLLVTRLVPNKDKDK 351
           +NP F IFL   +L +F S+ + ++ T L+  + K K
Sbjct: 423 SNPAFIIFLVFDALALFISLAVVVVQTSLIVVEQKAK 459


>08_02_1445 + 27149983-27150382,27151203-27151612,27151955-27152818
          Length = 557

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -2

Query: 461 NNPKFKIFLFMKSLCIFQSVCIFLLVTRLVPNKDKDK 351
           +NP F +FL   +L +F S+ + ++ T L+  + K K
Sbjct: 419 SNPAFLVFLVFDALALFISLAVVVVQTSLIVVEQKAK 455


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,720,738
Number of Sequences: 37544
Number of extensions: 213419
Number of successful extensions: 332
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)