Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0175
         (508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   1.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.4  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 122  PLVLRELHLISHNRETF 72
            PL+  E+H ++ N ETF
Sbjct: 1179 PLIRGEVHYLNRNEETF 1195


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 483 CGFSVARAFSRXRHLLCESGYHTTRCV 403
           CG S AR  +   HL   SG    RC+
Sbjct: 255 CGKSYARPSTLKTHLRTHSGEKPYRCI 281


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 122  PLVLRELHLISHNRETF 72
            PL+  E+H ++ N ETF
Sbjct: 1179 PLIRGEVHYLNRNEETF 1195


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 331 LHAFTQRQQLQTARQELSHALYQHDAACR 417
           L  +  R Q+    Q+   ++YQHD   R
Sbjct: 485 LPPYPNRTQITEVTQQTEPSIYQHDQLLR 513


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 377 N*VMHCTNTTQR 412
           N ++HC NTT R
Sbjct: 151 NFMLHCNNTTWR 162


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -2

Query: 444 HLLCESGYHTTR 409
           +++C  G+H TR
Sbjct: 327 YIICNEGHHATR 338


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -2

Query: 444 HLLCESGYHTTR 409
           +++C  G+H TR
Sbjct: 327 YIICNEGHHATR 338


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,134
Number of Sequences: 336
Number of extensions: 2477
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)