Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0172
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    25   0.42 
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   3.9  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.9  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.9  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   3.9  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   9.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.1  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 235 ENPSIIKENKNSEIWQNLCAL 297
           +NP  I E+KN E W+  C +
Sbjct: 466 QNPRTITESKNFEPWREKCVV 486


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 567 FGHTKTFIMRNPPTIAIPTNNGFKLYP 647
           F +++T+I      + IP  NG K+ P
Sbjct: 183 FEYSQTYIQHGYLELVIPPENGPKMTP 209


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 567 FGHTKTFIMRNPPTIAIPTNNGFKLYP 647
           F +++T+I      + IP  NG K+ P
Sbjct: 183 FEYSQTYIQHGYLELVIPPENGPKMTP 209


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 567 FGHTKTFIMRNPPTIAIPTNNGFKLYP 647
           F +++T+I      + IP  NG K+ P
Sbjct: 183 FEYSQTYIQHGYLELVIPPENGPKMTP 209


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +3

Query: 573 HTKTFIMRNPPTIAIPTNNGF-KLYPLVH 656
           H K  + +   T+A P +N F  L  +VH
Sbjct: 187 HVKKILEKETQTVAFPKDNHFLALLDIVH 215


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 285 SMCTLSNL*KVFPVC 329
           S CT  NL ++ PVC
Sbjct: 247 SSCTFDNLEELGPVC 261


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 346 GRCCKTHTGKTF 311
           GRCCKT  G  +
Sbjct: 102 GRCCKTCPGDLY 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,372
Number of Sequences: 336
Number of extensions: 3448
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)