Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0172
(665 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 31 0.11
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 31 0.11
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 31 0.11
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 31 0.11
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 31 0.11
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 31 0.11
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 31 0.11
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 31 0.11
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 31 0.11
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 31 0.11
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 31 0.11
SPCC777.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 31 0.20
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 27 1.8
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 27 2.4
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 27 3.2
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 26 4.2
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 26 5.6
SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo... 26 5.6
SPAC56E4.02c |alg13||N-acetylglucosaminyldiphosphodolichol N-ace... 25 7.4
SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual 25 7.4
SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr 2... 25 9.8
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 173 KIFTAFV*PQILTSDNSTHFVSPKFFNYKKMLGINQRRSVPYKPARNSQVERNVQTL 3
++ F P+ + +DN F S + ++ + S+PY+P + Q ER QT+
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTV 1092
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 173 KIFTAFV*PQILTSDNSTHFVSPKFFNYKKMLGINQRRSVPYKPARNSQVERNVQTL 3
++ F P+ + +DN F S + ++ + S+PY+P + Q ER QT+
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTV 1092
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 173 KIFTAFV*PQILTSDNSTHFVSPKFFNYKKMLGINQRRSVPYKPARNSQVERNVQTL 3
++ F P+ + +DN F S + ++ + S+PY+P + Q ER QT+
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTV 1092
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 173 KIFTAFV*PQILTSDNSTHFVSPKFFNYKKMLGINQRRSVPYKPARNSQVERNVQTL 3
++ F P+ + +DN F S + ++ + S+PY+P + Q ER QT+
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTV 1092
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 173 KIFTAFV*PQILTSDNSTHFVSPKFFNYKKMLGINQRRSVPYKPARNSQVERNVQTL 3
++ F P+ + +DN F S + ++ + S+PY+P + Q ER QT+
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTV 1092
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 173 KIFTAFV*PQILTSDNSTHFVSPKFFNYKKMLGINQRRSVPYKPARNSQVERNVQTL 3
++ F P+ + +DN F S + ++ + S+PY+P + Q ER QT+
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTV 1092
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 173 KIFTAFV*PQILTSDNSTHFVSPKFFNYKKMLGINQRRSVPYKPARNSQVERNVQTL 3
++ F P+ + +DN F S + ++ + S+PY+P + Q ER QT+
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTV 1092
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 173 KIFTAFV*PQILTSDNSTHFVSPKFFNYKKMLGINQRRSVPYKPARNSQVERNVQTL 3
++ F P+ + +DN F S + ++ + S+PY+P + Q ER QT+
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTV 1092
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 173 KIFTAFV*PQILTSDNSTHFVSPKFFNYKKMLGINQRRSVPYKPARNSQVERNVQTL 3
++ F P+ + +DN F S + ++ + S+PY+P + Q ER QT+
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTV 1092
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 173 KIFTAFV*PQILTSDNSTHFVSPKFFNYKKMLGINQRRSVPYKPARNSQVERNVQTL 3
++ F P+ + +DN F S + ++ + S+PY+P + Q ER QT+
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTV 1092
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 173 KIFTAFV*PQILTSDNSTHFVSPKFFNYKKMLGINQRRSVPYKPARNSQVERNVQTL 3
++ F P+ + +DN F S + ++ + S+PY+P + Q ER QT+
Sbjct: 1036 RVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTV 1092
>SPCC777.12c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 238
Score = 30.7 bits (66), Expect = 0.20
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = -1
Query: 281 CQISEFLFSFIIDGF-SKWPEVHILNSSTNSTIEVLNKIFTAFV*PQILTSDNSTHF-VS 108
C + E LF+ + F K+P+VH +S++E+ ++ + + P DN + VS
Sbjct: 85 CTLGELLFNDLSHAFHEKYPDVHFARVYLSSSLELSVRLLISRI-PSYYFIDNQNFYRVS 143
Query: 107 PKFFNYKKMLGINQR 63
P+ K + + ++
Sbjct: 144 PQVLPKNKAIALYEK 158
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 373 LTVVFSSFLNFIVHICHQN*QRAKESIIFVPKWQECKSF 489
LT + LNF+ ++ ++N ++ E +F+P +EC +
Sbjct: 449 LTAFLCALLNFLRYLKYRNSKKDTELSLFLPAPEECNIY 487
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 386 LVASLILLFIYATKINSELRRALYLFL 466
L A I+ ++Y + +NSELR + FL
Sbjct: 788 LAAEAIINYVYQSMLNSELRESFLAFL 814
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 113 VSPKFFNYKKMLGINQRRSVPYKPARNSQVERNVQ 9
V P N+K + Q+RSV Y P R+S ++Q
Sbjct: 540 VPPLPSNFKDKGHVPQQRSVSYTPKRSSDTSESLQ 574
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = -1
Query: 293 AHRFCQISEFLFSFIIDGFSKWPEVHILNSSTNSTIEVLNKIFTAFV*PQILTSDNSTHF 114
+H F ++S+ ++ F + + NS + + + K+F FV P +++ H
Sbjct: 555 SHEFYRVSKRFLDILLIWFESYLVEELDNSKSIFFLFKIYKVFEVFVVPHFASAEELLHS 614
Query: 113 VS 108
+S
Sbjct: 615 LS 616
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 25.8 bits (54), Expect = 5.6
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 280 QNLCALFQTFKRSFPCVFCSNVRWRVQM*RTLTVVFSSFLNFIV 411
Q L LF+ +RSF +F S W + + TL + F+SF F+V
Sbjct: 602 QALYFLFEHPRRSFTLLFPSKTTWVLFLNLTL-LNFASFFFFMV 644
>SPAC22E12.14c |sck2||serine/threonine protein kinase
Sck2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 646
Score = 25.8 bits (54), Expect = 5.6
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 467 SGKSANHSR*CVLDSGHTTPVPLIRQPSSKEN-LVWSYQNVHYEKP 601
S SAN SR + S H P P I++ SS N L SY KP
Sbjct: 150 SRDSANVSRSSSMMSSHPIPTPAIQRTSSIPNPLTPSYVVFDVAKP 195
>SPAC56E4.02c |alg13||N-acetylglucosaminyldiphosphodolichol
N-acetylglucosaminyltransferase Alg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 162
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +1
Query: 514 AHHPCASH*ATLKQGKFSLVIPKRSXXXXXXXXXXXXIMALNYIL*C 654
+H S TL+ GK LV+P S + ++NY++ C
Sbjct: 79 SHAGAGSILQTLRSGKRLLVVPNESLMDNHQVELATKLASMNYLVTC 125
>SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual
Length = 653
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 31 LFLAGL*GTDLL*FMPSIFL*LKNFGLTKCVLLSLVSIC 147
L L + T L+ F+P+I++ F LT+ +++ ++IC
Sbjct: 485 LLLGTILFTVLIFFLPTIYVFYAAFALTRVSVMTCLAIC 523
>SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 825
Score = 25.0 bits (52), Expect = 9.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 107 PKFFNYKKMLGINQRRSVPYKPARNSQVERNV 12
PK+ N K + G + VP K AR +RN+
Sbjct: 334 PKYLNGKFLEGTFRAHQVPLKLARTDTNQRNL 365
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,760,844
Number of Sequences: 5004
Number of extensions: 57253
Number of successful extensions: 164
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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