Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0172
         (665 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   3.7  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   5.0  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   8.7  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 14  HYAPLDYFWLVCKGQISSDLCQAFFYN*KISGLQSVYY 127
           +Y PL    LV  G I + L    F+N K+  L S YY
Sbjct: 44  YYMPL----LVVVGSIGNILSVLVFFNTKLKKLSSSYY 77


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = -1

Query: 149 PQILTSDNSTHFVSPKFFNYKKMLGINQRRSVPYKPARNSQVERNVQTL 3
           P+I+ SD    + +     +    GI    +  Y P +N   ER  ++L
Sbjct: 402 PRIIRSDQGGEYSNKALRKFCADEGIKMEFTAAYSPQQNGVAERKNRSL 450


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 475 ECKSFKIVCLRQWAHHPCASH 537
           EC+   +  + QW H  C+SH
Sbjct: 378 ECEGI-LATVGQWKHEGCSSH 397


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,826
Number of Sequences: 2352
Number of extensions: 15117
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)