Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0172
         (665 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92786-7|CAB07209.1|  145|Caenorhabditis elegans Hypothetical pr...    31   0.97 
AF440508-1|AAL34096.1|  144|Caenorhabditis elegans SKR-5 protein.      31   0.97 
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p...    28   5.2  

>Z92786-7|CAB07209.1|  145|Caenorhabditis elegans Hypothetical
           protein F47H4.10 protein.
          Length = 145

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = -1

Query: 146 QILTSDNSTHFVSPKFFNYKKMLG----INQRRSVPYK 45
           +I+TSD+    VSPK  N  K+L     +NQR  +P K
Sbjct: 9   KIVTSDDVEFIVSPKIANQSKLLADFVVLNQREPIPLK 46


>AF440508-1|AAL34096.1|  144|Caenorhabditis elegans SKR-5 protein.
          Length = 144

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = -1

Query: 146 QILTSDNSTHFVSPKFFNYKKMLG----INQRRSVPYK 45
           +I+TSD+    VSPK  N  K+L     +NQR  +P K
Sbjct: 8   KIVTSDDVEFIVSPKIANQSKLLADFVVLNQREPIPLK 45


>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
            C47E8.8 protein.
          Length = 1675

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 542  QPSSKENLVWSYQNVHYEKPSYHCNTY 622
            +P S E+L +SY+NV Y +  +   TY
Sbjct: 1512 EPRSTEHLSFSYENVAYTQAEFSSTTY 1538


>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
            protein C47E8.8 protein.
          Length = 1675

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 542  QPSSKENLVWSYQNVHYEKPSYHCNTY 622
            +P S E+L +SY+NV Y +  +   TY
Sbjct: 1512 EPRSTEHLSFSYENVAYTQAEFSSTTY 1538


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,195,993
Number of Sequences: 27780
Number of extensions: 318285
Number of successful extensions: 572
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)