Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0170
         (772 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    55   2e-06
UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    40   0.068
UniRef50_Q8NT43 Cluster: 2-succinyl-6-hydroxy-2,4-cyclohexadiene...    35   1.9  
UniRef50_Q6ZQR8 Cluster: CDNA FLJ45973 fis, clone PLACE7018349; ...    34   3.4  
UniRef50_Q7PSS9 Cluster: ENSANGP00000030130; n=1; Anopheles gamb...    33   5.9  
UniRef50_Q11YG7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 55.2 bits (127), Expect = 2e-06
 Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -1

Query: 349 PGKNVRNVRFLLVTC*P-DKLRSASIDK*KT*ALYKINFKQTKGIRPTGDTSKEKQNC 179
           P   +  + F+++   P D +   SI+K +   LYKIN KQTKGIR TGDTSKEKQNC
Sbjct: 9   PHTELSQILFMIILADPADFVVPQSINK-RPKHLYKINLKQTKGIRQTGDTSKEKQNC 65



 Score = 38.3 bits (85), Expect = 0.21
 Identities = 25/58 (43%), Positives = 32/58 (55%)
 Frame = -2

Query: 357 YPSREKTSVT*DFY**LADLTNFVVPQSISKRPKLCIK*TLNKQKESVRRATHQKKNK 184
           YP  E + +   F   LAD  +FVVPQSI+KRPK   K  L KQ + +R+     K K
Sbjct: 8   YPHTELSQIL--FMIILADPADFVVPQSINKRPKHLYKINL-KQTKGIRQTGDTSKEK 62


>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 47

 Score = 39.9 bits (89), Expect = 0.068
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +3

Query: 57  LKLENGWTDLASFTLELLVKVQ 122
           LKLENGWTDLA+F LEL V+VQ
Sbjct: 20  LKLENGWTDLANFGLELPVEVQ 41


>UniRef50_Q8NT43 Cluster:
           2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate
           synthase; n=3; Corynebacterium|Rep:
           2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate
           synthase - Corynebacterium glutamicum (Brevibacterium
           flavum)
          Length = 543

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +3

Query: 549 LRSVPRRPTPRYPSIEPFAP--PISARQSLKRQTCVPGRYRN*QPESLMPVGHPTLN 713
           L  VP    P  P  +P+ P  P++A   LK Q    G   N +P+ ++ VGHPTL+
Sbjct: 214 LEDVPTIAEPTAP--KPYNPVHPLAAEILLKEQVSAEGYVVNTRPDHVIVVGHPTLH 268


>UniRef50_Q6ZQR8 Cluster: CDNA FLJ45973 fis, clone PLACE7018349;
           n=1; Homo sapiens|Rep: CDNA FLJ45973 fis, clone
           PLACE7018349 - Homo sapiens (Human)
          Length = 260

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +2

Query: 509 VPFRGATVAKGIVTQVRAATTHPALPIY*TICTPN*CAPEFEAANMRPWPIP 664
           VP  G T  +G VT  ++ + H   P   ++ T   C P  +AAN+RPW  P
Sbjct: 155 VPGDGQT-KEGAVTCQKSLSNHSPTPESGSLSTVPPCLPSEDAANLRPWEHP 205


>UniRef50_Q7PSS9 Cluster: ENSANGP00000030130; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000030130 - Anopheles gambiae
           str. PEST
          Length = 116

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +3

Query: 555 SVPRRPTPRYPSIEPFAPPISARQSLKRQTCVPGRYRN*QPESLMPVGHPT 707
           S+ R P P  P + P  PP   +  L+R+  +P R R     +++PV HP+
Sbjct: 35  SLHRHPPPP-PPLRPPLPPHQQQHPLRRRPRLPPRSRPPTERAMLPVDHPS 84


>UniRef50_Q11YG7 Cluster: Putative uncharacterized protein; n=1;
           Cytophaga hutchinsonii ATCC 33406|Rep: Putative
           uncharacterized protein - Cytophaga hutchinsonii (strain
           ATCC 33406 / NCIMB 9469)
          Length = 391

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = -3

Query: 641 LPLQTLARTNWGCKWFN---RWVARGGSSRH 558
           L L  L    WG KWFN    W+A GG ++H
Sbjct: 197 LLLIALTGMQWGLKWFNHSLHWIASGGETKH 227


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,102,565
Number of Sequences: 1657284
Number of extensions: 13224249
Number of successful extensions: 31717
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31713
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)