Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0170
         (772 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0603 + 4937472-4938351,4938597-4938689,4938820-4939589,493...    32   0.58 
05_05_0174 - 22960732-22960815,22960907-22961419,22961576-229620...    28   7.2  
02_05_0146 - 26267245-26267339,26267427-26267469,26267589-262677...    28   9.5  

>12_01_0603 +
           4937472-4938351,4938597-4938689,4938820-4939589,
           4939706-4939809,4940026-4940548,4940697-4941074
          Length = 915

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 665 PVSARDACLPLQTLARTNWGCKWFNRWV 582
           P S R    PL +  RT WG KW ++W+
Sbjct: 171 PRSNRGCPWPLVSTMRTKWGSKWQSKWI 198


>05_05_0174 -
           22960732-22960815,22960907-22961419,22961576-22962058,
           22964191-22964673
          Length = 520

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +3

Query: 681 SLMPVGHPTLNFHSSICMSFYI--HCSPVCT 767
           +++P+G   +N  SS+   FY+  H SPVC+
Sbjct: 347 AILPLGRGFMNLSSSVPDRFYLGGHSSPVCS 377


>02_05_0146 -
           26267245-26267339,26267427-26267469,26267589-26267725,
           26268172-26268299,26268419-26268495,26268593-26268679,
           26268817-26268933,26269115-26269165,26269383-26269497,
           26270033-26270292
          Length = 369

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 558 VPRRPTPRYPSIEPFAPPISA 620
           VP    P +PS  PF PP+SA
Sbjct: 163 VPEGELPDFPSFIPFLPPLSA 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,074,660
Number of Sequences: 37544
Number of extensions: 361857
Number of successful extensions: 960
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)