Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0169
         (567 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   0.79 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.4  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   4.2  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   4.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   5.6  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   7.3  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 0.79
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 479 VFLVDYCSFVHCSSVIKSQVEHNNSDNYCAQDNCTP 372
           + L+D  SF    S   SQ+   + D +C  DN  P
Sbjct: 525 ISLIDEISFTFPPSPPLSQIHDLSPDQFCNGDNRPP 560


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -1

Query: 558  HHFLSISCSFNLISSLPACVIFICNNCISGRLLFI 454
            HH   +  SFN I  +P  + F  N  I  + +F+
Sbjct: 1309 HHLSKLIKSFNEIYGVPLLLFFGLNFLIITQAMFL 1343


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 9   VIHHVQVTKPSW 44
           VIHH+   KP+W
Sbjct: 86  VIHHLIENKPNW 97


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 9   VIHHVQVTKPSW 44
           VIHH+   KP+W
Sbjct: 86  VIHHLIENKPNW 97


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/32 (31%), Positives = 12/32 (37%)
 Frame = -3

Query: 340  SKQFCTNPTGPQPPRPMLANVGSPFAAKDGLH 245
            S++ CT P  P  P P     G    A    H
Sbjct: 999  SREDCTKPPEPVTPAPPQVTTGVDTGASSTEH 1030


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 506 LVSFSSAITVFLVDYCSFVHCSSVIKSQVEHNNS 405
           L S   A+T +LV +  F   S+   + V  NNS
Sbjct: 367 LYSIVGAVTTYLVIFIQFDQSSNSRNNYVLTNNS 400


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 361 SKVTCRYSKQFCTNPTGPQP 302
           ++V CR  K  C  PT  +P
Sbjct: 78  ARVQCRSIKNECPEPTCDEP 97


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 9   VIHHVQVTKPSW 44
           V+HH+   KP+W
Sbjct: 86  VLHHLIKNKPNW 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,846
Number of Sequences: 336
Number of extensions: 3263
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)