Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0169
(567 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X80695-1|CAA56712.1| 435|Homo sapiens OXA1Hs protein. 65 1e-10
BC112331-1|AAI12332.1| 496|Homo sapiens oxidase (cytochrome c) ... 65 1e-10
BC001669-1|AAH01669.2| 437|Homo sapiens OXA1L protein protein. 65 1e-10
AJ001981-1|CAA05127.1| 495|Homo sapiens OXA1L protein. 65 1e-10
BC101684-1|AAI01685.1| 333|Homo sapiens COX18 cytochrome c oxid... 33 0.53
BC071812-1|AAH71812.1| 156|Homo sapiens COX18 protein protein. 33 0.53
AY957565-1|AAY35061.1| 333|Homo sapiens mitochondrial COX18 pro... 33 0.53
AY957564-1|AAY35060.1| 333|Homo sapiens mitochondrial COX18 pro... 33 0.53
AK096310-1|BAC04758.1| 333|Homo sapiens protein ( Homo sapiens ... 33 0.53
BC110806-1|AAI10807.1| 234|Homo sapiens hypothetical LOC441177 ... 32 1.2
AK094116-1|BAC04291.1| 234|Homo sapiens protein ( Homo sapiens ... 32 1.2
>X80695-1|CAA56712.1| 435|Homo sapiens OXA1Hs protein.
Length = 435
Score = 65.3 bits (152), Expect = 1e-10
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +3
Query: 273 EPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFHL 425
E +FA +GLG + PVGL+QN E++HV L +PWWGAI T+ R ++F L
Sbjct: 108 EQSFAELGLGSYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPL 158
Score = 32.7 bits (71), Expect = 0.93
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 419 PLVILSQRNSAQMNNNLPEIQLLQMKMTQA 508
PL++ QR +A+++N+LPEIQ ++ +A
Sbjct: 157 PLIVTGQREAARIHNHLPEIQKFSSRIREA 186
>BC112331-1|AAI12332.1| 496|Homo sapiens oxidase (cytochrome c)
assembly 1-like protein.
Length = 496
Score = 65.3 bits (152), Expect = 1e-10
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +3
Query: 273 EPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFHL 425
E +FA +GLG + PVGL+QN E++HV L +PWWGAI T+ R ++F L
Sbjct: 168 EQSFAELGLGSYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPL 218
Score = 32.7 bits (71), Expect = 0.93
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 419 PLVILSQRNSAQMNNNLPEIQLLQMKMTQA 508
PL++ QR +A+++N+LPEIQ ++ +A
Sbjct: 217 PLIVTGQREAARIHNHLPEIQKFSSRIREA 246
>BC001669-1|AAH01669.2| 437|Homo sapiens OXA1L protein protein.
Length = 437
Score = 65.3 bits (152), Expect = 1e-10
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +3
Query: 273 EPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFHL 425
E +FA +GLG + PVGL+QN E++HV L +PWWGAI T+ R ++F L
Sbjct: 110 EQSFAELGLGSYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPL 160
Score = 32.7 bits (71), Expect = 0.93
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 419 PLVILSQRNSAQMNNNLPEIQLLQMKMTQA 508
PL++ QR +A+++N+LPEIQ ++ +A
Sbjct: 159 PLIVTGQREAARIHNHLPEIQKFSSRIREA 188
>AJ001981-1|CAA05127.1| 495|Homo sapiens OXA1L protein.
Length = 495
Score = 65.3 bits (152), Expect = 1e-10
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +3
Query: 273 EPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFHL 425
E +FA +GLG + PVGL+QN E++HV L +PWWGAI T+ R ++F L
Sbjct: 168 EQSFAELGLGSYTPVGLIQNLLEFMHVDLGLPWWGAIAACTVFARCLIFPL 218
Score = 32.7 bits (71), Expect = 0.93
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 419 PLVILSQRNSAQMNNNLPEIQLLQMKMTQA 508
PL++ QR +A+++N+LPEIQ ++ +A
Sbjct: 217 PLIVTGQREAARIHNHLPEIQKFSSRIREA 246
>BC101684-1|AAI01685.1| 333|Homo sapiens COX18 cytochrome c oxidase
assembly homolog (S. cerevisiae) protein.
Length = 333
Score = 33.5 bits (73), Expect = 0.53
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 297 LGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR 407
L PV + + +H +PWWG+I+L T+ +R
Sbjct: 58 LAASSPVRVAEEVLLGVHAATGLPWWGSILLSTVALR 94
>BC071812-1|AAH71812.1| 156|Homo sapiens COX18 protein protein.
Length = 156
Score = 33.5 bits (73), Expect = 0.53
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 297 LGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR 407
L PV + + +H +PWWG+I+L T+ +R
Sbjct: 58 LAASSPVRVAEEVLLGVHAATGLPWWGSILLSTVALR 94
>AY957565-1|AAY35061.1| 333|Homo sapiens mitochondrial COX18
protein.
Length = 333
Score = 33.5 bits (73), Expect = 0.53
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 297 LGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR 407
L PV + + +H +PWWG+I+L T+ +R
Sbjct: 58 LAASSPVRVAEEVLLGVHAATGLPWWGSILLSTVALR 94
>AY957564-1|AAY35060.1| 333|Homo sapiens mitochondrial COX18
protein.
Length = 333
Score = 33.5 bits (73), Expect = 0.53
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 297 LGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR 407
L PV + + +H +PWWG+I+L T+ +R
Sbjct: 58 LAASSPVRVAEEVLLGVHAATGLPWWGSILLSTVALR 94
>AK096310-1|BAC04758.1| 333|Homo sapiens protein ( Homo sapiens
cDNA FLJ38991 fis, clone NT2RI2008622. ).
Length = 333
Score = 33.5 bits (73), Expect = 0.53
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 297 LGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR 407
L PV + + +H +PWWG+I+L T+ +R
Sbjct: 58 LAASSPVRVAEEVLLGVHAATGLPWWGSILLSTVALR 94
>BC110806-1|AAI10807.1| 234|Homo sapiens hypothetical LOC441177
protein.
Length = 234
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 379 APHHGTSKVTCRYSKQFCTNPTGPQP-PRPMLANVG 275
AP + S V+ + Q CT P PQP PRP+ VG
Sbjct: 85 APEYINSAVSSQTLSQSCTPPQSPQPDPRPLSLRVG 120
>AK094116-1|BAC04291.1| 234|Homo sapiens protein ( Homo sapiens
cDNA FLJ36797 fis, clone ADRGL2006846. ).
Length = 234
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 379 APHHGTSKVTCRYSKQFCTNPTGPQP-PRPMLANVG 275
AP + S V+ + Q CT P PQP PRP+ VG
Sbjct: 85 APEYINSAVSSQTLSQSCTPPQSPQPDPRPLSLRVG 120
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,184,798
Number of Sequences: 237096
Number of extensions: 2003121
Number of successful extensions: 4930
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4930
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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