Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0166
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   1.7  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   4.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.3  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   9.2  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 72  FRKDEQGKFLWPGFGE 119
           F +++ GK +W GFG+
Sbjct: 276 FFEEKNGKVVWEGFGD 291


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 405 LSLFLVIXPTLLWGQLSLFYSPISLC 482
           ++ FL + P L W     FY    LC
Sbjct: 88  ITAFLSVLPQLAWDITYRFYGGFLLC 113


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 424  FXPHCCGASFP 456
            F   CCG SFP
Sbjct: 972  FSNRCCGGSFP 982


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 172 WQGSPSQRRKIQSKTREFSPKPGQ 101
           W   PS      SK  + +PKPGQ
Sbjct: 412 WARPPSTPSADGSKPVQTTPKPGQ 435


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 67  TGSVKTNRVSSSGPVSA 117
           T +V +N +SSSGP S+
Sbjct: 74  TNNVPSNGLSSSGPFSS 90


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 495 EDVEDRAKWGSRI 457
           +DVED  +W  RI
Sbjct: 303 QDVEDLKRWSDRI 315


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,670
Number of Sequences: 336
Number of extensions: 3023
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)