Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0166
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical pr... 118 4e-27
Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical pr... 118 4e-27
Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical pr... 118 4e-27
AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical ... 109 1e-24
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 109 1e-24
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 109 1e-24
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 86 2e-17
AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical... 40 0.002
U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily ass... 31 0.75
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 31 0.75
U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily ass... 31 0.75
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 31 0.75
Z81050-9|CAB02858.2| 400|Caenorhabditis elegans Hypothetical pr... 31 0.99
U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z92813-6|CAB07289.1| 627|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81071-7|CAE11303.1| 313|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z75526-6|CAD21698.1| 145|Caenorhabditis elegans Hypothetical pr... 28 7.0
>Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical
protein R11A5.4d protein.
Length = 618
Score = 118 bits (284), Expect = 4e-27
Identities = 49/85 (57%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 YLKHWLSMPQPGRKMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDGE-PCHAE 179
YL+HWL + RKMPKI+HVNWFRKD KFLWPGFG+N RV+DWI+RR DGE E
Sbjct: 489 YLQHWLDLKTDSRKMPKIYHVNWFRKDSNNKFLWPGFGDNIRVIDWIIRRLDGEQEIGVE 548
Query: 180 TPLGYIPRAGALNTENLSAVDMNKL 254
TP+G +P G++N E L V+ ++L
Sbjct: 549 TPIGTVPAKGSINLEGLGEVNWDEL 573
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 245 EQAVSIPKDFWLQEADAIXKYFKEEVGEDLPNEMWDELNKLRNNIQ 382
++ +S+P D+W Q+A I K+ E+VGEDLP + E++ +Q
Sbjct: 571 DELMSVPADYWKQDAQEIRKFLDEQVGEDLPEPVRAEMDAQEKRVQ 616
>Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical
protein R11A5.4c protein.
Length = 587
Score = 118 bits (284), Expect = 4e-27
Identities = 49/85 (57%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 YLKHWLSMPQPGRKMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDGE-PCHAE 179
YL+HWL + RKMPKI+HVNWFRKD KFLWPGFG+N RV+DWI+RR DGE E
Sbjct: 458 YLQHWLDLKTDSRKMPKIYHVNWFRKDSNNKFLWPGFGDNIRVIDWIIRRLDGEQEIGVE 517
Query: 180 TPLGYIPRAGALNTENLSAVDMNKL 254
TP+G +P G++N E L V+ ++L
Sbjct: 518 TPIGTVPAKGSINLEGLGEVNWDEL 542
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 245 EQAVSIPKDFWLQEADAIXKYFKEEVGEDLPNEMWDELNKLRNNIQ 382
++ +S+P D+W Q+A I K+ E+VGEDLP + E++ +Q
Sbjct: 540 DELMSVPADYWKQDAQEIRKFLDEQVGEDLPEPVRAEMDAQEKRVQ 585
>Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical
protein R11A5.4a protein.
Length = 654
Score = 118 bits (284), Expect = 4e-27
Identities = 49/85 (57%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 YLKHWLSMPQPGRKMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDGE-PCHAE 179
YL+HWL + RKMPKI+HVNWFRKD KFLWPGFG+N RV+DWI+RR DGE E
Sbjct: 525 YLQHWLDLKTDSRKMPKIYHVNWFRKDSNNKFLWPGFGDNIRVIDWIIRRLDGEQEIGVE 584
Query: 180 TPLGYIPRAGALNTENLSAVDMNKL 254
TP+G +P G++N E L V+ ++L
Sbjct: 585 TPIGTVPAKGSINLEGLGEVNWDEL 609
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 245 EQAVSIPKDFWLQEADAIXKYFKEEVGEDLPNEMWDELNKLRNNIQ 382
++ +S+P D+W Q+A I K+ E+VGEDLP + E++ +Q
Sbjct: 607 DELMSVPADYWKQDAQEIRKFLDEQVGEDLPEPVRAEMDAQEKRVQ 652
>AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical
protein W05G11.6c protein.
Length = 366
Score = 109 bits (263), Expect = 1e-24
Identities = 47/93 (50%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 YLKHWLSMPQPGRKMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDG--EPCHA 176
YL+HW+ + + K PKIFHVNWFR+ + KFLWPGFG+N RVLDWILRR G E
Sbjct: 236 YLEHWIKLGKAPHKAPKIFHVNWFRETKDHKFLWPGFGDNIRVLDWILRRVAGGEEEIAI 295
Query: 177 ETPLGYIPRAGALNTENLSAVDMNKLSAYLKTF 275
ET +GY+P+ G +N + L +D N L + K +
Sbjct: 296 ETAIGYVPKRGTINLDGLPRIDWNDLMSIPKDY 328
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2
Query: 254 VSIPKDFWLQEADAIXKYFKEEVGEDLPNEMWDELNKLRNNI 379
+SIPKD+W+++ D + +VG DLP + DEL+KL +
Sbjct: 322 MSIPKDYWVEDVDESRHFLDTQVGSDLPQPIRDELDKLEKRV 363
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 109 bits (263), Expect = 1e-24
Identities = 47/93 (50%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 YLKHWLSMPQPGRKMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDG--EPCHA 176
YL+HW+ + + K PKIFHVNWFR+ + KFLWPGFG+N RVLDWILRR G E
Sbjct: 411 YLEHWIKLGKAPHKAPKIFHVNWFRETKDHKFLWPGFGDNIRVLDWILRRVAGGEEEIAI 470
Query: 177 ETPLGYIPRAGALNTENLSAVDMNKLSAYLKTF 275
ET +GY+P+ G +N + L +D N L + K +
Sbjct: 471 ETAIGYVPKRGTINLDGLPRIDWNDLMSIPKDY 503
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2
Query: 254 VSIPKDFWLQEADAIXKYFKEEVGEDLPNEMWDELNKLRNNI 379
+SIPKD+W+++ D + +VG DLP + DEL+KL +
Sbjct: 497 MSIPKDYWVEDVDESRHFLDTQVGSDLPQPIRDELDKLEKRV 538
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 109 bits (263), Expect = 1e-24
Identities = 47/93 (50%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 YLKHWLSMPQPGRKMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDG--EPCHA 176
YL+HW+ + + K PKIFHVNWFR+ + KFLWPGFG+N RVLDWILRR G E
Sbjct: 521 YLEHWIKLGKAPHKAPKIFHVNWFRETKDHKFLWPGFGDNIRVLDWILRRVAGGEEEIAI 580
Query: 177 ETPLGYIPRAGALNTENLSAVDMNKLSAYLKTF 275
ET +GY+P+ G +N + L +D N L + K +
Sbjct: 581 ETAIGYVPKRGTINLDGLPRIDWNDLMSIPKDY 613
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2
Query: 254 VSIPKDFWLQEADAIXKYFKEEVGEDLPNEMWDELNKLRNNI 379
+SIPKD+W+++ D + +VG DLP + DEL+KL +
Sbjct: 607 MSIPKDYWVEDVDESRHFLDTQVGSDLPQPIRDELDKLEKRV 648
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 86.2 bits (204), Expect = 2e-17
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = +3
Query: 3 YLKHWLSMPQPGRKMPKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRCDG 161
YL+HW+ + + K PKIFHVNWFR+ + KFLWPGFG+N RVLDWILRR G
Sbjct: 521 YLEHWIKLGKAPHKAPKIFHVNWFRETKDHKFLWPGFGDNIRVLDWILRRVAG 573
>AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical
protein H04M03.1 protein.
Length = 624
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Frame = +3
Query: 3 YLKHWLSMPQPGRKM---------PKIFHVNWFRKDEQGKFLWPGFGENSRVLDWILRRC 155
Y+KHWL M + P+IF N +++ + GK LWPG +N+R+ ++I RC
Sbjct: 492 YVKHWLEMGVGVKSSSENFENPPPPQIFFTNLYQEVD-GKPLWPGGVDNARIFEYIYERC 550
Query: 156 DGEPCHAET---PLGYIPR 203
++T LG +P+
Sbjct: 551 ANPADLSKTISSGLGIVPK 569
>U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform d protein.
Length = 1379
Score = 31.1 bits (67), Expect = 0.75
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -3
Query: 294 ASASCSQKSLGMLTACSCRQRLGFPYSEHRLSVCTPVESRRGRAPHRSDVRSSLRPESSR 115
AS S Q+ + TA + ++G Y+ + SV T + R + R D S L P+S R
Sbjct: 522 ASLSSVQQKQPIKTADGGQLKIGSVYTWDQNSVDTTTDDERAKDFLRGDRSSRLSPQSER 581
Query: 114 RN 109
+N
Sbjct: 582 KN 583
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform b protein.
Length = 4034
Score = 31.1 bits (67), Expect = 0.75
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -3
Query: 294 ASASCSQKSLGMLTACSCRQRLGFPYSEHRLSVCTPVESRRGRAPHRSDVRSSLRPESSR 115
AS S Q+ + TA + ++G Y+ + SV T + R + R D S L P+S R
Sbjct: 522 ASLSSVQQKQPIKTADGGQLKIGSVYTWDQNSVDTTTDDERAKDFLRGDRSSRLSPQSER 581
Query: 114 RN 109
+N
Sbjct: 582 KN 583
>U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform a protein.
Length = 1633
Score = 31.1 bits (67), Expect = 0.75
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -3
Query: 294 ASASCSQKSLGMLTACSCRQRLGFPYSEHRLSVCTPVESRRGRAPHRSDVRSSLRPESSR 115
AS S Q+ + TA + ++G Y+ + SV T + R + R D S L P+S R
Sbjct: 522 ASLSSVQQKQPIKTADGGQLKIGSVYTWDQNSVDTTTDDERAKDFLRGDRSSRLSPQSER 581
Query: 114 RN 109
+N
Sbjct: 582 KN 583
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform c protein.
Length = 7548
Score = 31.1 bits (67), Expect = 0.75
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -3
Query: 294 ASASCSQKSLGMLTACSCRQRLGFPYSEHRLSVCTPVESRRGRAPHRSDVRSSLRPESSR 115
AS S Q+ + TA + ++G Y+ + SV T + R + R D S L P+S R
Sbjct: 522 ASLSSVQQKQPIKTADGGQLKIGSVYTWDQNSVDTTTDDERAKDFLRGDRSSRLSPQSER 581
Query: 114 RN 109
+N
Sbjct: 582 KN 583
>Z81050-9|CAB02858.2| 400|Caenorhabditis elegans Hypothetical
protein C50B6.11 protein.
Length = 400
Score = 30.7 bits (66), Expect = 0.99
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 212 SEYGKPKRCRHEQAVSIPKDFWLQEADAIXKYFKEEVGEDLPNEMWDE 355
S Y K K R E +++ +FW+QE ++I + + E NEMW +
Sbjct: 82 SGYSKHKIPR-ENGITVSVEFWIQEINSISEMTNDFELELFINEMWTD 128
>U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical
protein R02F2.5 protein.
Length = 223
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 322 RRRSTQRNVGRTEQVEEQHTRPS 390
+ R+ QRN R++Q+ QHT+PS
Sbjct: 8 KARNNQRNNQRSDQMNRQHTQPS 30
>Z92813-6|CAB07289.1| 627|Caenorhabditis elegans Hypothetical
protein T28A8.6 protein.
Length = 627
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 200 ESRCSEYGKPKRCRHEQAVSIPKDFWLQEADAIXKYFKEE 319
ES S YG PKR R E + S+P D + + + K E
Sbjct: 280 ESSISYYGSPKRARSEMS-SVPSDDEAEYIGGVEGFVKPE 318
>Z81071-7|CAE11303.1| 313|Caenorhabditis elegans Hypothetical
protein F28F8.8 protein.
Length = 313
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = -3
Query: 510 NNVADEDVEDRAKWGSRIGKAGPTTMWXK*LGREREV*FKAWPCMLFLNL--FSSSHISL 337
+N+ D ++D + IGK + W K + +K+ C +F++L FS I +
Sbjct: 177 DNIQDLKIDDHICF-DHIGKVVESNHWKK--AKSIHFIWKSCLCPVFMHLTHFSDIQIHM 233
Query: 336 GRSSPTSSLKYFXMASASCSQKSLGMLTAC 247
S + + + S + KSL + T C
Sbjct: 234 KNVSVHDANRIIQLLQISANFKSLNITTCC 263
>Z75526-6|CAD21698.1| 145|Caenorhabditis elegans Hypothetical
protein C06H2.6 protein.
Length = 145
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -3
Query: 309 KYFXMASASCSQKSLGMLTACSCRQRLGFPYSEHRLSVCTPVE 181
KY+ + A + + ML S R++L FP H +S+C P++
Sbjct: 86 KYYFIVHAGTNTNTGAML---SLREKL-FPIGSHMMSLCPPID 124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,294,606
Number of Sequences: 27780
Number of extensions: 322144
Number of successful extensions: 1005
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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