Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0165
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   2.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   2.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   3.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   5.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    20   9.4  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    20   9.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      20   9.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      20   9.4  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    20   9.4  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    20   9.4  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = +3

Query: 54  NHHDGRVFLWCHPFIIT--SVRDMGSRG 131
           NH  GR+   CH  + T   ++D  +RG
Sbjct: 276 NHQRGRILGGCHILVATPGRLKDFVNRG 303


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 118 WDPEAKAEYPRSNKLVI 168
           W P  KAE P SN + I
Sbjct: 95  WVPGGKAEVPPSNPIYI 111


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/28 (32%), Positives = 10/28 (35%)
 Frame = +2

Query: 95  HHHISQRHGIQRQKQNTHAATSSSFVKH 178
           HHH       Q    N H A + S   H
Sbjct: 323 HHHAGHHIHAQHHVVNHHVAANGSLKHH 350


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 12  SHVNVLLKISIN**NHHDGRVFLWCHPFIITSVRDMGSR 128
           S V+VLL+ ++    +   RV  W  P  +  + D G R
Sbjct: 68  SSVDVLLQEAVFEGTNRKNRVLQWREPEELRRLMDFGVR 106


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 355 PEP*TRVNVTGASGNSMSRRTCLDSPTFN 269
           P P +R +  G++ +SM    CL++   N
Sbjct: 231 PNPASRSSCLGSNTSSMLSLNCLNTGRTN 259


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 258 PVAVLKVGESRHV 296
           P+A++K G+  HV
Sbjct: 287 PIAIIKSGDYNHV 299


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 258 PVAVLKVGESRHV 296
           P+A++K G+  HV
Sbjct: 287 PIAIIKSGDYNHV 299


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 258 PVAVLKVGESRHV 296
           P+A++K G+  HV
Sbjct: 289 PIAIIKSGDYNHV 301


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 355 PEP*TRVNVTGASGNSMSRRTCLDSPTFN 269
           P P +R +  G++ +SM    CL++   N
Sbjct: 20  PNPASRSSCLGSNTSSMLSLNCLNTGRTN 48


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 355 PEP*TRVNVTGASGNSMSRRTCLDSPTFN 269
           P P +R +  G++ +SM    CL++   N
Sbjct: 20  PNPASRSSCLGSNTSSMLSLNCLNTGRTN 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,293
Number of Sequences: 336
Number of extensions: 2113
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)