Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0164
         (458 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q331X2 Cluster: Putative uncharacterized protein; n=1; ...    34   1.3  
UniRef50_Q4Y4M1 Cluster: Putative uncharacterized protein; n=4; ...    34   1.3  
UniRef50_Q7RG76 Cluster: Peptide chain release factor 1; n=6; ce...    32   5.2  
UniRef50_Q83YK9 Cluster: RapD; n=4; Bacillus cereus group|Rep: R...    31   9.0  
UniRef50_Q5CVB5 Cluster: Putative uncharacterized protein; n=2; ...    31   9.0  

>UniRef50_Q331X2 Cluster: Putative uncharacterized protein; n=1;
           Clostridium phage c-st|Rep: Putative uncharacterized
           protein - Clostridium botulinum C bacteriophage
          Length = 128

 Score = 34.3 bits (75), Expect = 1.3
 Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
 Frame = +1

Query: 4   LQIQNFPAEKSVLKKKNRKGKIYNNSLFLE---FCDLDHSYKDI 126
           LQIQ+F  +K  L  +  K ++YNN++++    +  L+H++KD+
Sbjct: 26  LQIQSFIKKKKALAIQQGKAEVYNNAMYMAEGVYTLLEHNFKDL 69


>UniRef50_Q4Y4M1 Cluster: Putative uncharacterized protein; n=4;
            Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein - Plasmodium chabaudi
          Length = 1135

 Score = 34.3 bits (75), Expect = 1.3
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -3

Query: 441  LNFENGFRTNYFKKKSFKLNLINYTN*IGNT 349
            ++F NG + NY K K + LN  NYT  IG++
Sbjct: 975  IHFSNGIKYNYNKNKQYYLNNFNYTGSIGSS 1005


>UniRef50_Q7RG76 Cluster: Peptide chain release factor 1; n=6;
            cellular organisms|Rep: Peptide chain release factor 1 -
            Plasmodium yoelii yoelii
          Length = 2075

 Score = 32.3 bits (70), Expect = 5.2
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = -3

Query: 435  FENGFRTNYFKKKSFKLNLINYTN*IGNTSYPIKLSHKTKCSM 307
            F+N F  N  +K + + N I YTN I +  + IK SH  KC++
Sbjct: 1394 FQNYFIQNNKQKIAKRENSILYTNMIIDNGHTIKSSHNVKCNV 1436


>UniRef50_Q83YK9 Cluster: RapD; n=4; Bacillus cereus group|Rep: RapD
           - Bacillus thuringiensis subsp. morrisoni
          Length = 369

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 414 NYFKKKSFKLNLINYTN*IGNTSYPIKLSHKTKCSMHSTSEA 289
           +YFKK+     + NY+  +GN  Y +K   K    +H T+EA
Sbjct: 317 SYFKKEELWKYVKNYSAVLGNKFYELKSYEKASKYLHMTNEA 358


>UniRef50_Q5CVB5 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 1024

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -3

Query: 453 IQKQLNFENG--FRTNYFKKKSFKLNLINYTN*IGNTSYPIKLSHKTK 316
           I +  N ++G  F   Y K   F  NLI+    +G+T Y +K++H +K
Sbjct: 460 ISRNRNQKSGEFFNIRYEKISKFSQNLISLRQILGSTKYKLKINHLSK 507


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 295,558,183
Number of Sequences: 1657284
Number of extensions: 4079816
Number of successful extensions: 9999
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9996
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)