Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0164
         (458 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    24   0.78 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    20   9.6  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.8 bits (49), Expect = 0.78
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 207 CVIKKYNMITC 175
           CV  KYNMITC
Sbjct: 128 CVDGKYNMITC 138


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 444 QLNFENGFRTNYFKKKSFKLN 382
           ++ FEN +   YF +  F +N
Sbjct: 325 EIGFENYYNILYFSRIMFHIN 345


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory
          receptor candidate 20 protein.
          Length = 393

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 67 FCLCGFFFLKHFFLL 23
          +C+CG+ F    F L
Sbjct: 47 YCICGYIFSAILFSL 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,117
Number of Sequences: 336
Number of extensions: 1329
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)