Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0159
(399 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 112 2e-26
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 112 2e-26
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 100 9e-23
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 98 4e-22
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 73 1e-14
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 51 6e-08
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 5e-05
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.12
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 29 0.35
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.35
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 1.4
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 2.5
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 26 2.5
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 25 4.3
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 4.3
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 5.7
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 5.7
SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomy... 25 5.7
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 24 7.6
SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|ch... 24 7.6
SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large... 24 10.0
SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyc... 24 10.0
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 24 10.0
SPBC14F5.09c |ade8||adenylosuccinate lyase Ade8|Schizosaccharomy... 24 10.0
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 24 10.0
SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomy... 24 10.0
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 10.0
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 112 bits (269), Expect = 2e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +3
Query: 81 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 254
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 72.1 bits (169), Expect = 3e-14
Identities = 30/49 (61%), Positives = 38/49 (77%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWHFEVVSDGGNPKIKVAYRVKT 397
PHNTIFDAKRLIGR+F D VQ+DMKHW F+V+ G P I+V ++ +T
Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGET 109
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 112 bits (269), Expect = 2e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +3
Query: 81 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 254
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 76.6 bits (180), Expect = 1e-15
Identities = 32/49 (65%), Positives = 40/49 (81%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWHFEVVSDGGNPKIKVAYRVKT 397
PHNTIFDAKRLIGRKF+D VQ+DMKHW F+V+S G P ++V Y+ +T
Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGET 109
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 100 bits (239), Expect = 9e-23
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +3
Query: 81 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 254
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
Score = 64.9 bits (151), Expect = 4e-12
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWHFEVVSDGGNPKIKVAY 385
P NT+FDAKRLIGR++ED Q D+KHW F+V+ + G P I+V Y
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNY 109
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 98.3 bits (234), Expect = 4e-22
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 254
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNP 94
Score = 52.8 bits (121), Expect = 2e-08
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWHFEVVSDGGNPKIKV 379
P NTIFD KRLIGRKF++ T+ D+K + F +V+D P ++V
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEV 136
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 73.3 bits (172), Expect = 1e-14
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +3
Query: 72 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 248
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 249 NPTTQY 266
NP +
Sbjct: 109 NPENTF 114
Score = 38.7 bits (86), Expect = 3e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWHFEVV 349
P NT F KRLIGR+F++ VQ D+K +++V
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIV 142
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 51.2 bits (117), Expect = 6e-08
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +3
Query: 69 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 248
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 249 N 251
N
Sbjct: 63 N 63
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.5 bits (93), Expect = 5e-05
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 251
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 30.3 bits (65), Expect = 0.12
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTT 260
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPA- 83
Query: 261 QYSMPNV 281
+S+ NV
Sbjct: 84 -HSIRNV 89
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 28.7 bits (61), Expect = 0.35
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 180 PSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLC 314
P +A T ER++ AAK A+N T Y++ ++ D K++ C
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.35
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 76 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 171
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 1.4
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 109 TLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRTRWR*TPQHNI 267
T +L S+STG+ T++ T L + PS S+ P T + TP +NI
Sbjct: 282 TSSLTSNSTGK-----TSKTTDLLIAASKKSLPSNSTPSKPNTSFFETPHNNI 329
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 2.5
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -1
Query: 162 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 4
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.8 bits (54), Expect = 2.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 225 AAKNQVAMNPTTQYSMPNVSSDVSSKML 308
A K Q+ +NP + +PNV D + +L
Sbjct: 323 ARKRQIQLNPFPPWDVPNVLEDQMNSLL 350
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 25.0 bits (52), Expect = 4.3
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -1
Query: 351 LTTSKCQCFMSACTVASSNLRPMRRLASNIVLWGSSPPGSWRHL 220
L S+ + ++S V +RP + + +IV+ GS++H+
Sbjct: 1173 LNASQAEAYLSKMQVGDLVIRPSSKGSDHIVVTWKVAEGSYQHI 1216
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 4.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 62 QNGKSTRSRNRSGYHVLLRWCLPARE 139
+NGK T +R +S + W P++E
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE 502
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 5.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 87 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 173
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 24.6 bits (51), Expect = 5.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 192 AFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDV 293
AF D + G AK A P+T+ + N+S V
Sbjct: 155 AFYDASQTFGSTAKVAPAPAPSTKTPLANISKPV 188
>SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 538
Score = 24.6 bits (51), Expect = 5.7
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = -3
Query: 379 YLDLRVASITDNLEMPVL-HVGLHSSIFELTSDETFGIEYCVVGFIATWFLAASPMRRSV 203
Y L + I LEM + +G H+ I + + ++ C F +W + + ++
Sbjct: 115 YYGLSLQEIQAVLEMVFIGKLGFHA-ILDTNASREIVLQQCAQEFCNSWLQSRAHKNQNQ 173
Query: 202 SVNAT*DGVVLLPWSLAMIS 143
N+ + L+P S + IS
Sbjct: 174 VTNSVVNEHPLIPHSTSQIS 193
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 24.2 bits (50), Expect = 7.6
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 106 RTLALVSSSTGR-WRSSPTTRATGPLRLMLRSQTPSVSSEMP 228
++L VSS++ + RSSP +L R TP+V + P
Sbjct: 351 QSLTTVSSNSSQNGRSSPKKSFLSKFKLTSRPSTPNVGNTAP 392
>SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 272
Score = 24.2 bits (50), Expect = 7.6
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 97 WVPRTLALVSSSTGRWRSSPTTRATGP-LRLMLRSQTPSVSS 219
W R + SSS R RSS ++R + P LRS S+SS
Sbjct: 90 WANRHSNVSSSSGSRGRSSVSSRDSSPSYSGALRSAERSISS 131
>SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large
subunit Rpc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1405
Score = 23.8 bits (49), Expect = 10.0
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 299 EDATVQADMKHWHFEVVSDGGNPKIKVAYRVKT 397
+ TV ++ H SDG + + +V YR++T
Sbjct: 1177 QQVTVNNTLQQIHVHTSSDGKSSETEVYYRLQT 1209
>SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 807
Score = 23.8 bits (49), Expect = 10.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 83 CGCFCHFVFLISL 45
C CFC + FL+S+
Sbjct: 384 CFCFCQYPFLLSM 396
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 23.8 bits (49), Expect = 10.0
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +3
Query: 81 AVGIDLGTTYSCVGVFQHGKVEIIAND 161
A+G LG Y+C+ +F + +A +
Sbjct: 428 AIGFKLGYIYACINLFSSFMIFFLAKE 454
>SPBC14F5.09c |ade8||adenylosuccinate lyase Ade8|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 482
Score = 23.8 bits (49), Expect = 10.0
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 370 LRVASITDN-LEMPVLHVGLHSSIFELTSDETFGIEYCVVGFIATWFLAASPMRRSVSVN 194
L + ITD +E HV + + FE+ + E + V+ I T+ LAA + +
Sbjct: 47 LGLTQITDEAIEQLKAHVKITAPEFEIAAKEEKRQRHDVMAHIYTYGLAAPAASGIIHLG 106
Query: 193 AT 188
AT
Sbjct: 107 AT 108
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 23.8 bits (49), Expect = 10.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 73 KHPQ*ESIWVPRTLAL 120
KHPQ + +WVP A+
Sbjct: 131 KHPQIDGVWVPYDRAI 146
>SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 271
Score = 23.8 bits (49), Expect = 10.0
Identities = 8/20 (40%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = -3
Query: 310 SSIFELTSDETFGIEY-CVV 254
S+++ELT DET +++ C++
Sbjct: 51 STVYELTGDETLNLKFTCIL 70
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 23.8 bits (49), Expect = 10.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 159 DQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
D+G T S+ +F D + + GDA + + A
Sbjct: 49 DEGLNTARSFSSFQDLKGMSGDAKEQESA 77
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,800,395
Number of Sequences: 5004
Number of extensions: 38113
Number of successful extensions: 147
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 134126124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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