Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0158
         (464 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   4.0  
AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse t...    23   6.9  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    22   9.2  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 126 IYWSRNETFKPNEEHRFYLMRFTKNMP 206
           +Y  R  +  P EEHR+YL++   + P
Sbjct: 473 VYIDRRNSIFP-EEHRYYLIKDGSSFP 498


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 126 IYWSRNETFKPNEEHRFYLMRFTKNMP 206
           +Y  R     P EEHR+YL++   + P
Sbjct: 474 VYIDRRNNIFP-EEHRYYLIKDGSSFP 499


>AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 129

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -3

Query: 378 MYDDLVKDCLRYHYPHYLVM*TFG*IVNRQTIKTLCKFV 262
           +Y+ ++++ L YH   Y+     G    R     L KFV
Sbjct: 14  VYEIVIQNSLMYHCRSYISTHQHGFFPRRSVTTNLVKFV 52


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 135  SRNETFKPNEEHRFYLMRFTK 197
            S +E  KPN EH F   ++T+
Sbjct: 1941 SSSEERKPNREHFFEKQQYTE 1961


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,745
Number of Sequences: 2352
Number of extensions: 5928
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40395045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)