Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0157
         (451 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    25   1.6  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   5.0  
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           23   5.0  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.6  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    22   8.7  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    22   8.7  

>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 185 FGMLPGFTFCLAVVTCDFSVDFKY 114
           FG +PG TF LA    D    FK+
Sbjct: 154 FGQIPGQTFYLATGRGDVPAKFKF 177


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = -2

Query: 291 HLNCKKRTKNKHKVIVVRKRTRCRFTSSSLHER 193
           HL  +K   ++ +++++    R  F S S+H+R
Sbjct: 220 HLQARKMLPSRPQLLLLELCKRSSFRSLSMHKR 252


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -2

Query: 246 VVRKRTRCRFTSSSLHERVCFWNVTRIH 163
           +++ +T  ++ + S+HE+  FW   R+H
Sbjct: 543 LLKTKTYIKWPTKSVHEQALFWK--RLH 568


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 266 RTNTKLLSYENVRVAGSQVHHYTNEF 189
           R N  LL YE +  + S+VH   N F
Sbjct: 41  RNNRALLIYERMGGSWSEVHKRNNFF 66


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 410 HWYLRRRRHSPYRFALFFYCYYTTENKI 327
           H   RRR  SP        CYY +E+++
Sbjct: 72  HSQRRRRSSSPRTRQFRSVCYYVSESEM 99


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 132 KITCHNCQTKG 164
           KITCH C+  G
Sbjct: 201 KITCHRCRKPG 211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,718
Number of Sequences: 2352
Number of extensions: 9274
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)