Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0156
(514 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 1.4
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 4.3
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 7.5
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 21 7.5
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 7.5
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.9
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 9.9
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 9.9
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 9.9
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 9.9
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 9.9
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 9.9
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 9.9
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 9.9
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 9.9
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.9
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.9
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 9.9
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.9
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +1
Query: 124 KTCIFYFVSCFIYIFSVV*FTSVCNYS 204
K Y V CF+++F+ + + NY+
Sbjct: 302 KAIDIYLVMCFVFVFAALLEYAAVNYT 328
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 4.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 433 N*MVHNIIYSTLNYSSNECLKNSSYVKC 350
N +++ IIY+TLN + + Y +C
Sbjct: 419 NSLLNPIIYATLNRDFRKPFREILYFRC 446
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.0 bits (42), Expect = 7.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 64 PFHLYFILKVFHSYCCNFIKKTCIFYFVS 150
PF + +LKV+ Y TC F F++
Sbjct: 184 PFTVLPLLKVWGRYTTEGFLTTCSFDFLT 212
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 21.0 bits (42), Expect = 7.5
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = -1
Query: 394 YSSNECLKNSSYVKC 350
Y+ ++C K YV+C
Sbjct: 117 YTGDDCQKTYQYVQC 131
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.0 bits (42), Expect = 7.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 64 PFHLYFILKVFHSYCCNFIKKTCIFYFVS 150
PF + +LKV+ Y TC F F++
Sbjct: 184 PFTVLPLLKVWGRYTTEGFLTTCSFDFLT 212
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 364 NYSSNIHLKNSSVLSKLYY 420
NY++N + N +KLYY
Sbjct: 93 NYNNNYNNYNKHNYNKLYY 111
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 364 NYSSNIHLKNSSVLSKLYY 420
NY++ + N++ KLYY
Sbjct: 99 NYNNKYNYNNNNYNKKLYY 117
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 364 NYSSNIHLKNSSVLSKLYY 420
NY++N + N +KLYY
Sbjct: 93 NYNNNYNNYNKHNYNKLYY 111
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 364 NYSSNIHLKNSSVLSKLYY 420
NY++N + N +KLYY
Sbjct: 93 NYNNNYNNYNKHNYNKLYY 111
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 364 NYSSNIHLKNSSVLSKLYY 420
NY++N + N +KLYY
Sbjct: 93 NYNNNYNNYNKHNYNKLYY 111
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 364 NYSSNIHLKNSSVLSKLYY 420
NY++N + N +KLYY
Sbjct: 93 NYNNNYNNYNKHNYNKLYY 111
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 364 NYSSNIHLKNSSVLSKLYY 420
NY++N + N +KLYY
Sbjct: 93 NYNNNYNNYNKHNYNKLYY 111
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 364 NYSSNIHLKNSSVLSKLYY 420
NY++N + N +KLYY
Sbjct: 93 NYNNNYNNYNKHNYNKLYY 111
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 364 NYSSNIHLKNSSVLSKLYY 420
NY++N + N +KLYY
Sbjct: 93 NYNNNYNNYNKHNYNKLYY 111
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 364 NYSSNIHLKNSSVLSKLYY 420
NY++N + N +KLYY
Sbjct: 93 NYNNNYNNYNKHNYNKLYY 111
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 364 NYSSNIHLKNSSVLSKLYY 420
NY++N + N +KLYY
Sbjct: 326 NYNNNYNNYNKHNYNKLYY 344
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 364 NYSSNIHLKNSSVLSKLYY 420
NY++N + N +KLYY
Sbjct: 326 NYNNNYNNYNKHNYNKLYY 344
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 20.6 bits (41), Expect = 9.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 219 NKKIQKFIATLEYYVYSILFSTYSVNSMYSNIL*F 323
N+ I+KF+ L+ ++ + N+M+ NIL F
Sbjct: 312 NQDIEKFLNYLKRGGKTLTSISVESNTMFINILKF 346
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 464 PNRTMRKC*KQLNG 423
PN +RKC +NG
Sbjct: 584 PNSAVRKCMSPING 597
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,864
Number of Sequences: 438
Number of extensions: 2653
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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