Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0154
         (523 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    27   0.13 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.7  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 26.6 bits (56), Expect = 0.13
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = -1

Query: 127 LIFCSYLLHS*VFITTQ*GVVVIIWVSLIIQYFVYASHCND 5
           LI+ SY   + +FIT +   V+++W+S  + + +   HCN+
Sbjct: 122 LIWKSYK-RTQIFITCELFFVILLWISFFLNFML---HCNN 158


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 181 FSFFFTIVFVRVVLQGKYLIFCSYLL 104
           + FF  + + R+V+    ++F  Y L
Sbjct: 30  YQFFLAVQYPRIVVSTFNIVFYMYTL 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,030
Number of Sequences: 336
Number of extensions: 2906
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)