Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0154
(523 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 72 5e-14
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 62 5e-11
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 61 1e-10
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 60 3e-10
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 59 3e-10
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 58 1e-09
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 53 3e-08
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 53 3e-08
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 53 3e-08
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 52 5e-08
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 52 7e-08
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 51 1e-07
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 51 1e-07
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 50 2e-07
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 50 3e-07
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 48 8e-07
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 41 1e-04
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 37 0.002
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 32 0.060
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 29 0.32
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 29 0.42
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 27 1.7
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 26 3.0
SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1 |Schizosacch... 25 5.2
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces... 25 5.2
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 25 6.8
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 25 6.8
SPCC132.04c |||NAD-dependent glutamate dehydrogenase |Schizosacc... 25 9.0
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 25 9.0
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 72.1 bits (169), Expect = 5e-14
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMK-FQKLKEAKEILCDPSKR 238
DYYA+L +N+T +QI +Y LALQ+HPD+N G++E +K FQ+L+ A E+L D +KR
Sbjct: 12 DYYAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKR 71
Query: 239 ALYDK 253
+YD+
Sbjct: 72 LIYDQ 76
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 62.1 bits (144), Expect = 5e-11
Identities = 30/75 (40%), Positives = 45/75 (60%)
Frame = +2
Query: 35 LNYQRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKE 214
L +++ D+Y +LG + +T +I Y+ LAL +HPDKN G EAE +F+++ EA
Sbjct: 340 LELKKSKRKDHYKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYT 399
Query: 215 ILCDPSKRALYDKCV 259
IL DP R +D V
Sbjct: 400 ILSDPESRRRFDSGV 414
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 60.9 bits (141), Expect = 1e-10
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +2
Query: 44 QRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKN-DGEKEAEMKFQKLKEAKEIL 220
QR D DYY +L ++ + I Y+ LA+ +HPDKN + + A KFQKL EA ++L
Sbjct: 3 QRVVDRDYYDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVL 62
Query: 221 CDPSKRALYDK 253
DP R YDK
Sbjct: 63 SDPKLREKYDK 73
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 59.7 bits (138), Expect = 3e-10
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +2
Query: 56 DDDYYALLGCDENSTVEQITAEYKILALQHHPDKN-DGEKEAEMKFQKLKEAKEILCDPS 232
D +YY LLG ++T I Y+ LA+++HPDKN D + A KFQK+ EA ++L D
Sbjct: 6 DTEYYDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEK 65
Query: 233 KRALYDK 253
R+ YD+
Sbjct: 66 LRSQYDQ 72
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 59.3 bits (137), Expect = 3e-10
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 DYYALLGCDENSTVEQITAEYKILALQHHPDKNDG-EKEAEMKFQKLKEAKEILCDPSKR 238
DYY +LG + S+ +I +Y L L++HPD+N G E E +FQ +++A E+L DP R
Sbjct: 12 DYYTILGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLR 71
Query: 239 ALYDK 253
L+D+
Sbjct: 72 ELFDQ 76
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 57.6 bits (133), Expect = 1e-09
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +2
Query: 74 LLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALYD 250
+LG ++++ +I Y+ L Q HPDKN G +EA+ KF ++ +A E+L DP +R +YD
Sbjct: 11 ILGVSKDASESEIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRKIYD 69
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 52.8 bits (121), Expect = 3e-08
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Frame = +2
Query: 56 DDDYYALLGCDENSTVEQITAEYKILALQHHPDK-NDGEK--EAEMKFQKLKEAKEILCD 226
D D Y++LG +++++ E I Y+ ALQHHPD+ +D EK EA ++F K+ A +L D
Sbjct: 29 DIDPYSVLGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSD 88
Query: 227 PSKRALYDK 253
+R YDK
Sbjct: 89 KKRRKHYDK 97
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 52.8 bits (121), Expect = 3e-08
Identities = 25/63 (39%), Positives = 40/63 (63%)
Frame = +2
Query: 62 DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRA 241
D Y LG ++++ +I + Y LA Q+HPD N +K A+ KF ++K+A E+L DP K+
Sbjct: 86 DPYKTLGVSKSASASEIKSAYYKLAKQYHPDANP-DKAAQDKFVEIKQAYEVLQDPKKKK 144
Query: 242 LYD 250
+D
Sbjct: 145 AFD 147
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 52.8 bits (121), Expect = 3e-08
Identities = 29/77 (37%), Positives = 44/77 (57%)
Frame = +2
Query: 23 VDEILNYQRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLK 202
V +I+ Y+ + YY +L + T +I YK LALQ HPDKN A+ F+ +
Sbjct: 103 VQKIIKYKNH---QYYEILDLKKTCTDTEIKKSYKKLALQLHPDKNHA-PSADEAFKMVS 158
Query: 203 EAKEILCDPSKRALYDK 253
+A ++L DP+ RA YD+
Sbjct: 159 KAFQVLSDPNLRAHYDR 175
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 52.0 bits (119), Expect = 5e-08
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 62 DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEA--EMKFQKLKEAKEILCDPSK 235
+ Y LG +++T +QI Y L+ HPD++ +++A E KFQ ++ A E+L DPSK
Sbjct: 8 ELYLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSK 67
Query: 236 RALYD 250
+ +YD
Sbjct: 68 KEIYD 72
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 51.6 bits (118), Expect = 7e-08
Identities = 24/66 (36%), Positives = 40/66 (60%)
Frame = +2
Query: 56 DDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSK 235
D D Y +L + +S +++I A Y+ LALQ+HPD+N G ++ F ++ A IL + K
Sbjct: 7 DMDCYEILQVNHDSDLQEIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILSNDDK 66
Query: 236 RALYDK 253
R ++K
Sbjct: 67 RKWHEK 72
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 50.8 bits (116), Expect = 1e-07
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +2
Query: 62 DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRA 241
DYY LLG +E++ ++I ++ +L++HPDKN + +A KF L+ A L D R
Sbjct: 9 DYYELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRK 68
Query: 242 LYD 250
YD
Sbjct: 69 AYD 71
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 50.8 bits (116), Expect = 1e-07
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +2
Query: 56 DDDYYALLGCDENSTVEQITAEYKILALQHHPDKN--DGEKEAEMKFQKLKEAKEILCDP 229
D Y +L ++ E+I YK LAL HHPDK ++EA +F+ ++EA +IL DP
Sbjct: 4 DTKLYDILEVHFEASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILKDP 63
Query: 230 SKRALYD 250
R +YD
Sbjct: 64 ESREMYD 70
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 50.0 bits (114), Expect = 2e-07
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 62 DYYALLGCDENSTVEQITAEYKILALQHHPDK--NDGEKEAEMKFQKLKEAKEILCDPSK 235
DYYA+L ++ E+I YK AL+ HPD+ A +FQ + EA +L D S+
Sbjct: 4 DYYAILNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSR 63
Query: 236 RALYDK 253
RA YD+
Sbjct: 64 RAQYDR 69
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 49.6 bits (113), Expect = 3e-07
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +2
Query: 68 YALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALY 247
Y +L D ++ ++ Y+ LAL++HPDKN A KF+++ A EIL D KRA Y
Sbjct: 8 YEVLNVDVTASQAELKKAYRKLALKYHPDKN---PNAGDKFKEISRAYEILADEEKRATY 64
Query: 248 DK 253
D+
Sbjct: 65 DR 66
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 48.0 bits (109), Expect = 8e-07
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 56 DDDYYALLGCDENSTVEQITAEYKILALQHHPDKN-DGEKEAEMKFQKLKEAKEILCDPS 232
D Y L ++ ++ Y+ LAL++HPDKN +GEK KF+++ A E+L DP
Sbjct: 4 DTKLYDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEK----KFKEISLAYEVLSDPQ 59
Query: 233 KRALYDK 253
+R LYD+
Sbjct: 60 RRKLYDQ 66
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 41.1 bits (92), Expect = 1e-04
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Frame = +2
Query: 62 DYYALLGCDE---NSTVEQITAEYKILALQHHPDKN--DGEKEAEMKFQKLKEAKEILCD 226
D+YA+LG + + EQI + L+HHPDK G + F+ +++A EIL D
Sbjct: 97 DHYAVLGLSKYRYKADTEQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEILSD 156
Query: 227 PSKRALYD 250
P +R +D
Sbjct: 157 PVRRRQFD 164
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 36.7 bits (81), Expect = 0.002
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +2
Query: 62 DYYALLGCDENSTVEQITAEYKILALQHHPDK-----NDGEKEAEMKFQKLKEAKEILCD 226
D Y +LG + ++V+ + YK L+++ HPDK N +E E + ++ A L D
Sbjct: 98 DPYEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTD 157
Query: 227 PSKRALY 247
R Y
Sbjct: 158 DKTRENY 164
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 31.9 bits (69), Expect = 0.060
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 23 VDEILNYQRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKE 175
VD + + +N +Y LL +++++I Y+ ++ +HPDKN KE
Sbjct: 28 VDSLKSILKNKAT-FYELLEVPTKASIKEINRAYRKKSILYHPDKNPKSKE 77
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 29.5 bits (63), Expect = 0.32
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 68 YALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALY 247
Y +L +V+ I Y+ +L HPDKN +A F LK+A+ L + R
Sbjct: 33 YDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAADAFDILKKAESDLVNDKIRESL 92
Query: 248 D 250
D
Sbjct: 93 D 93
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 29.1 bits (62), Expect = 0.42
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 62 DYYALLGCDENSTV--EQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSK 235
++Y++L + T ++I Y+ L HPDK + ++KEA ++L
Sbjct: 2 NHYSVLNLKDGKTYTDDEIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKD 61
Query: 236 RALY 247
R Y
Sbjct: 62 RQQY 65
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 342 IRLGPVHGLLHMIFHTQPLLEAHSYTTTTHLS 247
I L P H L+++ + P L SYT T L+
Sbjct: 427 ITLAPQHSFLNIVINLNPALALKSYTIITLLN 458
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 3.0
Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 13/75 (17%)
Frame = +2
Query: 68 YALLGCDENSTVEQITAEYKILALQHHPDKNDG-------------EKEAEMKFQKLKEA 208
Y +L T I +Y L +HHPDK K E F+ L A
Sbjct: 34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQLAPTESPPEINKHNEEYFRLLLAA 93
Query: 209 KEILCDPSKRALYDK 253
+L D +R YD+
Sbjct: 94 NALLSDKRRREEYDR 108
>SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 305 IMCSSPCTGPSLILRIACWKEMEAS 379
I C SPC+G +LIL + +++ S
Sbjct: 334 ITCGSPCSGEALILGLNVLSKVDLS 358
>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 967
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 86 HNPVGRSSHHLGFFDNSIFRLRQSL*R 6
HNP +SS HL ++ F L +S+ R
Sbjct: 248 HNPSKKSSQHLPLLPDASFELERSVSR 274
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 25.0 bits (52), Expect = 6.8
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 101 VEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCD-PSKRALYDKCVVVV*LW 277
V IT+ Y+I K E+ E + + A EIL D +K+ L D+ ++V W
Sbjct: 1535 VNSITSLYEISESFSGETKQAYEQLVETMNKSVSPASEILSDLDNKQQLNDQIIIVFVSW 1594
>SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1205
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 98 TVEQITAEYKILALQHHPDKNDGEKEAEMKF 190
T+E + A Y I L HHPD + E E + F
Sbjct: 972 TMEYV-ATYLIHLLSHHPDISSIESENSLDF 1001
>SPCC132.04c |||NAD-dependent glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1106
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -2
Query: 381 RLASISFQHAILSIRLGPVHGLLHMIFHTQPLLEAHSYTTTTHLSYRAR 235
RL++++F + + GL+H +F L A ++ +T HL +RA+
Sbjct: 459 RLSTLAFTRTKIHDTIMQYPGLVHTLFEQFYLEHAINHNSTPHL-HRAK 506
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +2
Query: 119 EYKILALQHHPDKNDGEKEAEMKF 190
EY ++Q HP+ G ++ E F
Sbjct: 413 EYPFFSVQFHPESTPGPRDTEFLF 436
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,252,416
Number of Sequences: 5004
Number of extensions: 44376
Number of successful extensions: 145
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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