Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0152
         (679 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0916 + 32950575-32950656,32952061-32952272,32952408-329524...    30   1.5  
05_04_0302 - 20004802-20005360,20005412-20005623                       29   4.5  
02_02_0222 - 8017291-8018454                                           29   4.5  
01_06_0917 + 32978306-32978434,32978570-32978645,32979324-329793...    28   6.0  
05_04_0120 - 18175292-18176206,18177315-18177785,18178562-18179635     28   7.9  
02_05_0188 + 26587267-26587446,26587733-26587979,26588358-26588665     28   7.9  

>01_06_0916 +
           32950575-32950656,32952061-32952272,32952408-32952448,
           32952916-32952959,32953259-32953561,32954145-32954302,
           32954849-32954965,32955562-32955747,32955872-32956031,
           32956079-32956151,32958613-32958889,32959024-32959099,
           32960653-32960720,32961270-32961361,32961505-32961578,
           32961777-32961820,32962155-32962206,32962585-32962704,
           32962777-32962889,32963023-32963110,32963492-32963577,
           32964172-32964258,32964491-32964594,32964996-32965098,
           32965250-32965345,32965456-32965645,32965777-32965838,
           32966014-32966118,32966782-32966983,32967092-32967300,
           32968510-32968673,32968799-32968850,32968935-32969021,
           32969319-32969441,32969567-32969605,32969606-32969860
          Length = 1447

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 448 VRVVPASRPSWIISSRWTRY-MWKRRAAGDHPGHNPERDAYEALAACPHMRGV 603
           ++ V +     ++S  W  Y + K  A+ DHP H     ++E L   P  RG+
Sbjct: 649 IKAVDSEHKKNLLSDGWRMYQLQKHLASKDHPYHKFSTGSWETLETKPKERGL 701


>05_04_0302 - 20004802-20005360,20005412-20005623
          Length = 256

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +1

Query: 460 PASRPSWIISSRWTRYMWKRRAAGD-HPG-HNPERDAYEA 573
           P+SR  W  SS W R    + AA +  PG H P  DA  A
Sbjct: 80  PSSRWRWRYSSSWQRRRDSKLAAAEAQPGRHGPAEDALAA 119


>02_02_0222 - 8017291-8018454
          Length = 387

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 31/137 (22%), Positives = 55/137 (40%)
 Frame = +1

Query: 58  LQISKRVCLCAGLR*VTQGWLLELRIPSGSRLSYPDDFTCGLSDSTRSWSI*SDYLRKTK 237
           L + +   L AGL      +L  +R+PS  RL Y    + G   S     +   ++ +T 
Sbjct: 190 LSVEQTAELAAGLEMSGHNFLWVVRMPSTGRLPY----SMGAGHSNPMNFLPEGFVERTS 245

Query: 238 LLCLLKGRPLAYQRWYPIQALASHHAARGTRSHANSYGTSCTAFGTVEVLSY*RFGTIGA 417
                 GR LA   W P   + +H A     SH     T  +    V ++++  +     
Sbjct: 246 ------GRGLAVASWAPQVRVLAHPATAAFVSHCGWNSTLESVSSGVPMIAWPLYAEQKM 299

Query: 418 SFRCVTEISFVRVVPAS 468
           +   +TE++ V + P +
Sbjct: 300 NTVILTEVAGVALRPVA 316


>01_06_0917 +
           32978306-32978434,32978570-32978645,32979324-32979391,
           32979868-32979959,32980121-32980194,32980372-32980415,
           32980752-32980803,32981200-32981319,32981391-32981503,
           32981674-32981761,32982144-32982229,32982832-32982918,
           32983149-32983252,32983607-32983709,32983861-32983956,
           32984067-32984256,32984352-32984413,32984560-32984664,
           32985163-32985364,32985473-32985681,32986413-32986537,
           32986644-32986695,32986772-32986858,32987125-32987247,
           32987375-32987629
          Length = 913

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +1

Query: 448 VRVVPASRPSWIISSRWTRY-MWKRRAAGDHPGHNPERDAYEALAACPHMRGV 603
           ++ V +     ++S  W  Y + K  A+ DHP H     + E L   P  RG+
Sbjct: 141 IKAVDSEHKKNLLSDSWRMYQLQKHLASKDHPYHKFNIGSCETLETKPKERGL 193


>05_04_0120 - 18175292-18176206,18177315-18177785,18178562-18179635
          Length = 819

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = -2

Query: 537 VVARSTTFPHVPGPAGANDPGWPASWNHSDE--RDFSNASEAGADSSKALIAKNFNSS 370
           + A S++FP  P P  ++DP  P     SD     F + S + +D S A ++    +S
Sbjct: 19  IAAASSSFPSPPSPTTSSDPASPLDAFASDPVLSAFLSPSFSPSDFSSAALSSGLAAS 76


>02_05_0188 + 26587267-26587446,26587733-26587979,26588358-26588665
          Length = 244

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 439 ISFVRVVPASRPSWIISSRWTRYMWKRRAAGDHPGHNPERDAY 567
           +SF   V      +++S    R MW RR A  H  H P+  A+
Sbjct: 90  VSFATSVHVLPHYYVVSPVGARQMWCRRRADGHHHHYPDVPAW 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,456,418
Number of Sequences: 37544
Number of extensions: 395301
Number of successful extensions: 1420
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)