Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0152
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061607-1|AAL29155.1|  441|Drosophila melanogaster SD07279p pro...    58   1e-08
AE014134-1696|AAF52813.2|  441|Drosophila melanogaster CG4026-PA...    58   1e-08

>AY061607-1|AAL29155.1|  441|Drosophila melanogaster SD07279p
           protein.
          Length = 441

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 43/109 (39%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
 Frame = +2

Query: 374 LLKFLAINALELSAPASDALLKSRSSE-------WFQLAGHPGSLAPAGPGTCGNVVLRA 532
           LLKFLAINALELSAPA+  LL+ + +        W QL+GHP S+ P   G     +   
Sbjct: 126 LLKFLAINALELSAPATPHLLQHQQAHKQAKPQGWMQLSGHPESIVPTSTGIVRKRISGL 185

Query: 533 TTPATTLNEMLTKPLQLVLICVALFLATIVNWNTTVNGFIELQDLLHGF 679
                    ++ K  Q   I  A F   I    +    FIELQDLL GF
Sbjct: 186 EDSEVHAYRLICKEPQTAQIVPAYF--GIQEMQS--QHFIELQDLLAGF 230


>AE014134-1696|AAF52813.2|  441|Drosophila melanogaster CG4026-PA
           protein.
          Length = 441

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 43/109 (39%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
 Frame = +2

Query: 374 LLKFLAINALELSAPASDALLKSRSSE-------WFQLAGHPGSLAPAGPGTCGNVVLRA 532
           LLKFLAINALELSAPA+  LL+ + +        W QL+GHP S+ P   G     +   
Sbjct: 126 LLKFLAINALELSAPATPHLLQHQQAHKQAKPQGWMQLSGHPESIVPTSTGIVRKRISGL 185

Query: 533 TTPATTLNEMLTKPLQLVLICVALFLATIVNWNTTVNGFIELQDLLHGF 679
                    ++ K  Q   I  A F   I    +    FIELQDLL GF
Sbjct: 186 EDSEVHAYRLICKEPQTAQIVPAYF--GIQEMQS--QHFIELQDLLAGF 230


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,615,077
Number of Sequences: 53049
Number of extensions: 618773
Number of successful extensions: 1904
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1900
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)