Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0152
(679 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88314-4|AAK71360.1| 494|Caenorhabditis elegans Let-23 fertilit... 40 0.002
U88314-3|AAK71361.1| 394|Caenorhabditis elegans Let-23 fertilit... 40 0.002
U88314-2|AAF99884.2| 461|Caenorhabditis elegans Let-23 fertilit... 40 0.002
AF045613-1|AAC38962.1| 461|Caenorhabditis elegans inositol tris... 40 0.002
AF045612-1|AAC38961.1| 394|Caenorhabditis elegans inositol tris... 40 0.002
AF045611-1|AAC38960.1| 494|Caenorhabditis elegans inositol tris... 40 0.002
U41264-3|AAA82423.1| 574|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z68011-1|CAA92012.1| 584|Caenorhabditis elegans Hypothetical pr... 29 3.0
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z82280-3|CAB05265.1| 387|Caenorhabditis elegans Hypothetical pr... 28 7.0
AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical ... 28 7.0
>U88314-4|AAK71360.1| 494|Caenorhabditis elegans Let-23 fertility
effector/regulatorprotein 2, isoform a protein.
Length = 494
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 386 LAINALELSAPASDALLKSRSSEWFQLAGHPGSLAPAGPGT 508
+++ + ++A D LK R +W QL+GH GS+ PA P T
Sbjct: 174 VSVETMAITALPMDVWLKERLKKWVQLSGHEGSIVPATPHT 214
>U88314-3|AAK71361.1| 394|Caenorhabditis elegans Let-23 fertility
effector/regulatorprotein 2, isoform b protein.
Length = 394
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 386 LAINALELSAPASDALLKSRSSEWFQLAGHPGSLAPAGPGT 508
+++ + ++A D LK R +W QL+GH GS+ PA P T
Sbjct: 74 VSVETMAITALPMDVWLKERLKKWVQLSGHEGSIVPATPHT 114
>U88314-2|AAF99884.2| 461|Caenorhabditis elegans Let-23 fertility
effector/regulatorprotein 2, isoform c protein.
Length = 461
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 386 LAINALELSAPASDALLKSRSSEWFQLAGHPGSLAPAGPGT 508
+++ + ++A D LK R +W QL+GH GS+ PA P T
Sbjct: 141 VSVETMAITALPMDVWLKERLKKWVQLSGHEGSIVPATPHT 181
>AF045613-1|AAC38962.1| 461|Caenorhabditis elegans inositol
trisphosphate 3-kinaseform 3 protein.
Length = 461
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 386 LAINALELSAPASDALLKSRSSEWFQLAGHPGSLAPAGPGT 508
+++ + ++A D LK R +W QL+GH GS+ PA P T
Sbjct: 141 VSVETMAITALPMDVWLKERLKKWVQLSGHEGSIVPATPHT 181
>AF045612-1|AAC38961.1| 394|Caenorhabditis elegans inositol
trisphosphate 3-kinaseform 2 protein.
Length = 394
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 386 LAINALELSAPASDALLKSRSSEWFQLAGHPGSLAPAGPGT 508
+++ + ++A D LK R +W QL+GH GS+ PA P T
Sbjct: 74 VSVETMAITALPMDVWLKERLKKWVQLSGHEGSIVPATPHT 114
>AF045611-1|AAC38960.1| 494|Caenorhabditis elegans inositol
trisphosphate 3-kinaseform 1 protein.
Length = 494
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 386 LAINALELSAPASDALLKSRSSEWFQLAGHPGSLAPAGPGT 508
+++ + ++A D LK R +W QL+GH GS+ PA P T
Sbjct: 174 VSVETMAITALPMDVWLKERLKKWVQLSGHEGSIVPATPHT 214
>U41264-3|AAA82423.1| 574|Caenorhabditis elegans Hypothetical
protein F10E7.9 protein.
Length = 574
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/31 (35%), Positives = 24/31 (77%)
Frame = -1
Query: 157 SSDESQTGFVTREATPASLIANQHTNTLAYL 65
S++E++TG +++EAT S+ +N++ + L +L
Sbjct: 440 STEETETGIISQEATWYSMFSNRYVSFLGFL 470
>Z68011-1|CAA92012.1| 584|Caenorhabditis elegans Hypothetical
protein T21B6.1 protein.
Length = 584
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 503 GTCGNVVLRATTPATTLNEMLTKPLQLVLICVALFLATIV 622
G C V +TT A T+ + QL+LICV LFL ++
Sbjct: 447 GNCDETVEISTT-APTVESIQEADSQLLLICVLLFLLLLI 485
>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
protein F37A4.4 protein.
Length = 1163
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +2
Query: 536 TPATTLNEMLTKPLQLVLICVALFLA----TIVNWNTTVNG 646
TP ++ T P+ +VLICVA+ L IV + T NG
Sbjct: 751 TPKVSVQSESTSPIVVVLICVAIVLVLVILAIVGYGFTSNG 791
>Z82280-3|CAB05265.1| 387|Caenorhabditis elegans Hypothetical
protein R05A10.3 protein.
Length = 387
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 540 GVVARSTTFPHVPGPAGANDPGWPASWNHSDERDFSNASE 421
GV T P++P P PG S + SD DF+++S+
Sbjct: 133 GVPEGPTKEPYMPKPITKPKPGQNNSGSFSDSTDFTDSSD 172
>AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical
protein Y47D3A.5 protein.
Length = 222
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 177 RALRQYQKLVDLKRLPSKDKVAVPSKRKTAGIPKMVPYSSVGVAPRRP 320
R RQ++ V L R PS++ P + P P + VAPR P
Sbjct: 65 RPRRQFRS-VRLPRTPSRNSPLTPPTKTPPHTPTRTPTTESPVAPRTP 111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,816,346
Number of Sequences: 27780
Number of extensions: 300793
Number of successful extensions: 1121
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -