Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0152
(679 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 25 0.88
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 25 0.88
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 25 0.88
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 25 0.88
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 25 0.88
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 23 2.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.7
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.5
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 6.2
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 6.2
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 6.2
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 8.2
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 24.6 bits (51), Expect = 0.88
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +2
Query: 437 KSRSSEWFQLAGHPGSL-APAGPGT 508
K + W QLAGH G+ A PGT
Sbjct: 236 KKQRYPWVQLAGHQGNFRAGPTPGT 260
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 24.6 bits (51), Expect = 0.88
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +2
Query: 437 KSRSSEWFQLAGHPGSL-APAGPGT 508
K + W QLAGH G+ A PGT
Sbjct: 151 KKQRYPWVQLAGHQGNFRAGPTPGT 175
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 24.6 bits (51), Expect = 0.88
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +2
Query: 437 KSRSSEWFQLAGHPGSL-APAGPGT 508
K + W QLAGH G+ A PGT
Sbjct: 470 KKQRYPWVQLAGHQGNFRAGPTPGT 494
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 24.6 bits (51), Expect = 0.88
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 292 QALASHHAARGTRSHANSYGTSCTAFGTV 378
+A H RG R A YG++ + GT+
Sbjct: 254 RARMGFHGMRGKRDAAGIYGSNSSTVGTI 282
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 24.6 bits (51), Expect = 0.88
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 292 QALASHHAARGTRSHANSYGTSCTAFGTV 378
+A H RG R A YG++ + GT+
Sbjct: 254 RARMGFHGMRGKRDAAGIYGSNSSTVGTI 282
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 434 LKSRSSEWFQLAGHPGSLAP 493
++ + WF AG PG L+P
Sbjct: 62 VQGEAQAWFGFAGTPGYLSP 81
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 2.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 521 VLRATTPATTLNEMLTKPLQLVLICVALFLAT 616
VLRA+TPA + E + +++++ FL T
Sbjct: 1107 VLRASTPAPVVLEAVHASRRVLIVLTRNFLLT 1138
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 477 GWPASWNHSDERDFSNASEAGADSSK 400
G+ H DE+ SN + G D S+
Sbjct: 178 GFKVDLRHMDEKSGSNVVDVGVDLSE 203
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 477 GWPASWNHSDERDFSNASEAGADSSK 400
G+ H DE+ SN + G D S+
Sbjct: 178 GFKVDLRHMDEKSGSNVVDVGVDLSE 203
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 238 LLCLLKGRPLAYQRWY 285
LLC +G P+ RWY
Sbjct: 232 LLCPAQGFPVPVHRWY 247
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 265 LAYQRWYPIQALASH 309
+ Y W+ IQA+A+H
Sbjct: 232 IIYSYWFIIQAVAAH 246
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 265 LAYQRWYPIQALASH 309
+ Y W+ IQA+A+H
Sbjct: 108 IIYSYWFIIQAVAAH 122
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.8 bits (44), Expect = 6.2
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 157 SSDESQTGFVTREATPASLIANQH 86
+ D S +G + PAS +N+H
Sbjct: 259 NEDSSDSGAAASDRPPASASSNEH 282
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 183 LRQYQKLVDLKRLPSKDK 236
L +Y+K++ +KRL KD+
Sbjct: 436 LIEYKKMLKIKRLFGKDR 453
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,773
Number of Sequences: 438
Number of extensions: 3641
Number of successful extensions: 23
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -