Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0152
         (679 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g23050.2 68416.m02905 auxin-responsive protein / indoleacetic...    27   8.6  
At3g23050.1 68416.m02906 auxin-responsive protein / indoleacetic...    27   8.6  

>At3g23050.2 68416.m02905 auxin-responsive protein / indoleacetic
           acid-induced protein 7 (IAA7) identical to
           SP|Q38825|AXI7_ARATH Auxin-responsive protein IAA7
           (Indoleacetic acid-induced protein 7)
          Length = 210

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = -2

Query: 564 SISFRVVAGVVARSTTF--PHVPGPAGANDPGWPASWNHSDERDFSNASEAGADSSKALI 391
           S+  + V+ V    TT   P  P PA A   GWP   N+         + +GA+ + +  
Sbjct: 55  SVDLKNVSAVPKEKTTLKDPSKP-PAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEK 113

Query: 390 AKNF 379
           A NF
Sbjct: 114 AGNF 117


>At3g23050.1 68416.m02906 auxin-responsive protein / indoleacetic
           acid-induced protein 7 (IAA7) identical to
           SP|Q38825|AXI7_ARATH Auxin-responsive protein IAA7
           (Indoleacetic acid-induced protein 7)
          Length = 243

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = -2

Query: 564 SISFRVVAGVVARSTTF--PHVPGPAGANDPGWPASWNHSDERDFSNASEAGADSSKALI 391
           S+  + V+ V    TT   P  P PA A   GWP   N+         + +GA+ + +  
Sbjct: 55  SVDLKNVSAVPKEKTTLKDPSKP-PAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEK 113

Query: 390 AKNF 379
           A NF
Sbjct: 114 AGNF 117


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,215,183
Number of Sequences: 28952
Number of extensions: 287310
Number of successful extensions: 920
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)