Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0151
(745 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 111 8e-26
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 73 6e-14
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 64 2e-11
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 64 3e-11
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 62 6e-11
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 60 2e-10
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 60 3e-10
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 56 4e-09
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 54 3e-08
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 53 5e-08
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 53 5e-08
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 52 7e-08
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 52 7e-08
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 52 9e-08
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 51 2e-07
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 48 2e-06
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 47 3e-06
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 46 4e-06
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 27 2.8
SPBC19G7.02 |||4-amino-4-deoxychorismate lyase |Schizosaccharomy... 26 4.9
SPBC36B7.02 |||Svf1 family protein Svf2|Schizosaccharomyces pomb... 26 6.5
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 26 6.5
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 26 6.5
SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces ... 26 6.5
SPAC212.04c |||S. pombe specific DUF999 family protein 1|Schizos... 25 8.6
SPAC6F6.08c |cdc16|bub2|two-component GAP Cdc16|Schizosaccharomy... 25 8.6
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 111 bits (268), Expect = 8e-26
Identities = 47/105 (44%), Positives = 76/105 (72%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMR 422
VG GGVGKSALT+Q + F+++YDPTIED YRK+ E+D +L++LDTAG E++++MR
Sbjct: 14 VGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQEEYSAMR 73
Query: 423 DLYIKNGQGFVVVYSLTNHQTFQDIKPMKN*LLVSKDQNVYQFYL 557
+ Y++ G+GF++VY++T+ +F +I +L KD++ + L
Sbjct: 74 EQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVL 118
Score = 64.9 bits (151), Expect = 1e-11
Identities = 36/74 (48%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Frame = +2
Query: 515 ITRVKGSERVPILLVGNKADLEHQREVAHAEGAALAQMWGCPFVEASAKSRTNVNEMFAE 694
I RVK + P++LV NK DLE +R V+ AEG LA+ C +VE SAK R NV E F
Sbjct: 105 ILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYS 164
Query: 695 IVREM---NVSPEK 727
+VR + N S EK
Sbjct: 165 LVRTIRRYNKSEEK 178
Score = 29.5 bits (63), Expect = 0.53
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 205 LRSTIMREFKVVVLGSGG 258
+RST +RE+K+VV+G GG
Sbjct: 1 MRSTYLREYKLVVVGDGG 18
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 72.5 bits (170), Expect = 6e-14
Identities = 34/93 (36%), Positives = 59/93 (63%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMR 422
+G VGKS+LTVQ+V F+E Y PTIE+ + K I+ EI+DTAG ++++ +
Sbjct: 12 LGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEYSILN 71
Query: 423 DLYIKNGQGFVVVYSLTNHQTFQDIKPMKN*LL 521
+ G+V+VYS+T+ +F+ +K +++ +L
Sbjct: 72 SKHSIGIHGYVLVYSITSKSSFEMVKIVRDKIL 104
Score = 62.1 bits (144), Expect = 8e-11
Identities = 31/69 (44%), Positives = 39/69 (56%)
Frame = +2
Query: 530 GSERVPILLVGNKADLEHQREVAHAEGAALAQMWGCPFVEASAKSRTNVNEMFAEIVREM 709
G+E VPI++VGNK+DL QR V EG ALA W C + EASA+ NV F I+ E+
Sbjct: 108 GTEWVPIVVVGNKSDLHMQRAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEI 167
Query: 710 NVSPEKEKP 736
P
Sbjct: 168 EKQANPSPP 176
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 64.5 bits (150), Expect = 2e-11
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASM 419
+G GVGKS L ++F + E Y TI DF + E++ L+I DTAG E+F ++
Sbjct: 14 IGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTI 73
Query: 420 RDLYIKNGQGFVVVYSLTNHQTFQDIK 500
Y + G ++VY +T+ +F ++K
Sbjct: 74 TSSYYRGAHGIIIVYDVTDQDSFNNVK 100
Score = 43.6 bits (98), Expect = 3e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 536 ERVPILLVGNKADLEHQREVAHAEGAALAQMWGCPFVEASAKSRTNVNEMFAEIVREM 709
E V LLVGNK+D+ ++ V ++ A PF+E SAK TNV + F + R++
Sbjct: 112 EGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 63.7 bits (148), Expect = 3e-11
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDNSPCVLEILDTAGTEQFASM 419
+G GVGK+ L QFV+ F +Y TI DF K++ VD+ L++ DTAG E+F S+
Sbjct: 14 LGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSL 73
Query: 420 RDLYIKNGQGFVVVYSLTNHQTFQDIKPMKN*LL--VSKDQNVYQFYL 557
+ + V+VY++ N ++F ++ + L S+D+ + F +
Sbjct: 74 GMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFII 121
Score = 27.5 bits (58), Expect = 2.1
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +2
Query: 545 PILLVGNKADLEHQREVAHAEGAA--LAQMWGCPFV--EASAKSRTNVNEMFAEIVR 703
P ++VGN+ D + + A G + EASAK TNV ++F + R
Sbjct: 118 PFIIVGNQIDKDASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 62.5 bits (145), Expect = 6e-11
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASM 419
+G GVGKS L ++F F + TI DF + IE+D L+I DTAG E+F ++
Sbjct: 15 IGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTI 74
Query: 420 RDLYIKNGQGFVVVYSLTNHQTFQDIKPMKN*LLVSKDQNVYQFYL 557
Y + G +++Y +T+ ++F +++ + + +NVY+ +
Sbjct: 75 TTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILI 120
Score = 59.3 bits (137), Expect = 6e-10
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = +2
Query: 533 SERVPILLVGNKADLEHQREVAHAEGAALAQMWGCPFVEASAKSRTNVNEMFAEIVREM 709
SE V +L+GNK D E QR+V+ +G ALA G F+EASAK+ NV+E F + RE+
Sbjct: 112 SENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 60.5 bits (140), Expect = 2e-10
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDNSPCVLEILDTAGTEQFASM 419
+G GVGK+++ Q+V+ F + Y TI DF KE+ VD+ L++ DTAG E+F S+
Sbjct: 14 LGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSL 73
Query: 420 RDLYIKNGQGFVVVYSLTNHQTFQDIKPMKN*LLV 524
+ + V+VY + N ++F+ + ++ L+
Sbjct: 74 GVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLI 108
Score = 42.3 bits (95), Expect = 7e-05
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 536 ERVPILLVGNKADLEHQ-REVAHAEGAALAQMWG-CPFVEASAKSRTNVNEMFAEIVR 703
E P +L+GNK D+E Q R V+ ++ A Q G P+ E SAK NV E F + +
Sbjct: 116 ETFPFILLGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAK 173
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 60.1 bits (139), Expect = 3e-10
Identities = 28/86 (32%), Positives = 47/86 (54%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMR 422
VG G VGK+ L + + + F Y PT+ D Y + + + P L + DTAG E + +R
Sbjct: 9 VGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLR 68
Query: 423 DLYIKNGQGFVVVYSLTNHQTFQDIK 500
L F+V +S+T+ +F+++K
Sbjct: 69 PLSYPQTDVFLVCFSVTSPASFENVK 94
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 56.4 bits (130), Expect = 4e-09
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASM 419
+G VGK++L +F+ F Y TI DF K + +++ L++ DTAG E+F S+
Sbjct: 17 LGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 76
Query: 420 RDLYIKNGQGFVVVYSLTNHQTF 488
YI++ ++VY +TNH +F
Sbjct: 77 IPSYIRDSSVAIIVYDITNHNSF 99
Score = 41.1 bits (92), Expect = 2e-04
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +2
Query: 521 RVKGSERVPILLVGNKADLEHQREVAHAEGAALAQMWGCPFVEASAKSRTNVNEMFAEIV 700
R + + V I+LVGNK DL +R+V EG A+ +E SAK+ NV +F +I
Sbjct: 110 RAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIA 169
Query: 701 R 703
+
Sbjct: 170 Q 170
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 53.6 bits (123), Expect = 3e-08
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASM 419
+G GVGKS L ++F F + TI +F + I +DN +I DTAG E++ ++
Sbjct: 16 IGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAI 75
Query: 420 RDLYIKNGQGFVVVYSLTNHQTFQDIKPMKN*LLVSKDQNV 542
Y + G ++VY +T +F ++ L D N+
Sbjct: 76 TSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNI 116
Score = 46.0 bits (104), Expect = 6e-06
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +2
Query: 521 RVKGSERVPILLVGNKADLEHQREVAHAEGAALAQMWGCPFVEASAKSRTNVNEMFAEIV 700
R + I+LVGNK DL H R V+ E A A F+E SA +NV E F ++
Sbjct: 109 REHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVL 168
Query: 701 REM 709
E+
Sbjct: 169 TEI 171
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 52.8 bits (121), Expect = 5e-08
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDNSPCV-LEILDTAGTEQFAS 416
+G VGKS+L ++FV F + + TI F + + +D + V LEI DTAG E++ S
Sbjct: 20 LGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKS 79
Query: 417 MRDLYIKNGQGFVVVYSLTNHQTFQDIK 500
+ +Y +N +VVY +T + + K
Sbjct: 80 LAPMYYRNANCAIVVYDITQAASLEKAK 107
Score = 42.7 bits (96), Expect = 5e-05
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 536 ERVPILLVGNKADL-EHQREVAHAEGAALAQMWGCPFVEASAKSRTNVNEMFAEIVREM 709
E + I L GNK DL + +R V A+ A A F E SAK+ NVNE+F I +++
Sbjct: 119 EGIVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 52.8 bits (121), Expect = 5e-08
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMR 422
VG G GK+ L + F G F E Y PT+ + Y ++EVD L + DTAG E + +R
Sbjct: 12 VGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLR 71
Query: 423 DLYIKNGQGFVVVYSLTNHQTFQDIK 500
L + ++ +S+ ++ +++
Sbjct: 72 PLSYPDSHVVLICFSVDAPESLDNVQ 97
Score = 32.3 bits (70), Expect = 0.075
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 13/67 (19%)
Frame = +2
Query: 542 VPILLVGNKADLEH------------QREVAHAEGAALAQMWGC-PFVEASAKSRTNVNE 682
+PILLVG K DL + Q+ + EG +AQ G ++E SAK VNE
Sbjct: 111 LPILLVGCKVDLRNDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNE 170
Query: 683 MFAEIVR 703
+F R
Sbjct: 171 VFETAAR 177
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 52.4 bits (120), Expect = 7e-08
Identities = 25/86 (29%), Positives = 45/86 (52%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMR 422
VG G GK+ L + F G F E Y PT+ + Y ++EVD L + DTAG E + +R
Sbjct: 12 VGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLR 71
Query: 423 DLYIKNGQGFVVVYSLTNHQTFQDIK 500
L + ++ +++ + + +++
Sbjct: 72 PLSYPDSHVILICFAVDSPDSLDNVQ 97
Score = 31.5 bits (68), Expect = 0.13
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 13/67 (19%)
Frame = +2
Query: 542 VPILLVGNKADLE------------HQREVAHAEGAALAQMWGC-PFVEASAKSRTNVNE 682
+PILLV KADL +Q V EG A+AQ G ++E SAK+ V E
Sbjct: 111 LPILLVACKADLRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVRE 170
Query: 683 MFAEIVR 703
+F R
Sbjct: 171 VFESATR 177
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 52.4 bits (120), Expect = 7e-08
Identities = 24/85 (28%), Positives = 47/85 (55%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMR 422
+G G GK++L F G F + Y+PTI + Y +I VD + L + DTAG E++ +R
Sbjct: 19 LGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLR 78
Query: 423 DLYIKNGQGFVVVYSLTNHQTFQDI 497
L + ++ +++ + + +++
Sbjct: 79 SLSYSDTHVIMICFAVDSRDSLENV 103
Score = 29.1 bits (62), Expect = 0.70
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 563 NKADLEHQREVAHAEGAALAQMWGCP-FVEASAKSRTNVNEMFAEIVR 703
++ ++H + + + EG A A+ ++E SAK VNE F E R
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 52.0 bits (119), Expect = 9e-08
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEIL--DTAGTEQFAS 416
VG GG GK+ L + F SG F E+Y PT+ + Y +I + V+E+ DTAG E++
Sbjct: 20 VGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDR 79
Query: 417 MRDLYIKNGQGFVVVYSL 470
+R L N ++ +S+
Sbjct: 80 LRPLSYPNSNVILLCFSI 97
Score = 38.3 bits (85), Expect = 0.001
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 12/62 (19%)
Frame = +2
Query: 539 RVPILLVGNKADLEHQRE------------VAHAEGAALAQMWGCPFVEASAKSRTNVNE 682
R PI+LVG KADL R V + + ++A P+VE SAK T VNE
Sbjct: 120 RTPIVLVGLKADLRKDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNE 179
Query: 683 MF 688
+F
Sbjct: 180 VF 181
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 51.2 bits (117), Expect = 2e-07
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +3
Query: 216 NNARI*SGRVGFGGVGKSALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDNSPCVLEILDT 392
NN I G +G +GK++L V +V G F E+ T+ +F K I + N+ I D
Sbjct: 7 NNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDL 66
Query: 393 AGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 500
G +F +M + + + ++ L+ T IK
Sbjct: 67 GGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIK 102
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 47.6 bits (108), Expect = 2e-06
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +3
Query: 246 GFGGVGKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEV----DNSPCVLEILDTAGTEQF 410
G G GKS L +FV + ++ T+ DF + I V L+I DTAG E+F
Sbjct: 16 GPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKF 75
Query: 411 ASMRDLYIKNGQGFVVVYSLTNHQTFQDI 497
S+ Y + G V+VY +TN +F+++
Sbjct: 76 RSVARNYYRGAAGAVLVYDVTNKDSFEEL 104
Score = 32.3 bits (70), Expect = 0.075
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 521 RVKGSERVPILLVGNKADLEHQREVAHAEGAAL-AQMWGCPFVEASAKSRTNVNEMFAEI 697
R + ++L G+K+DL++QR+V+ E A ++ E S+ + +NV E F +
Sbjct: 112 RAMAPSTICVVLAGSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSV 171
Query: 698 V 700
V
Sbjct: 172 V 172
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 46.8 bits (106), Expect = 3e-06
Identities = 23/85 (27%), Positives = 43/85 (50%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMR 422
VG G GK++L F G F +Y PT+ + Y + VD L + DTAG E++ +R
Sbjct: 14 VGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLR 73
Query: 423 DLYIKNGQGFVVVYSLTNHQTFQDI 497
+ +V +++ + + +++
Sbjct: 74 PMSYAKAHIILVGFAIDSPDSLENV 98
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 46.4 bits (105), Expect = 4e-06
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASM 419
VG GG GK+ + ++G F +KY T+ + + + + DTAG E+ +
Sbjct: 15 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGL 74
Query: 420 RDLYIKNGQGFVVVYSLTNHQTFQDI 497
RD Y GQ ++++ +T+ T++++
Sbjct: 75 RDGYYIQGQCGIIMFDVTSRITYKNV 100
Score = 34.3 bits (75), Expect = 0.019
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +2
Query: 524 VKGSERVPILLVGNKADLEHQREVAHAEGAALAQMWGCPFVEASAKSRTNVNEMFAEIVR 703
V+ E +PI+L GNK D++ ++ A+ + + + SAKS N + F + R
Sbjct: 108 VRVCENIPIVLCGNKVDVKERK--VKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLAR 165
Query: 704 EMNVSPEKE 730
++ +P E
Sbjct: 166 KLVGNPNLE 174
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -3
Query: 353 FDFFSVEILYRRIIFFHKTS*YKLHSQRTLSDPPEPNTTTLNSRIIV 213
FD SV L+RR + + ++ K HS++ S+P + L +R+ +
Sbjct: 104 FDHASVTSLHRRSLSSNTSTPRKYHSRKPYSEPSVIDKEHLQNRVSI 150
>SPBC19G7.02 |||4-amino-4-deoxychorismate lyase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 231
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 305 GKI*SDDRGFLQKRN-RSGQFSLCFRNF 385
G I DD+G LQK N ++G+ L F +F
Sbjct: 175 GSIHEDDKGLLQKDNLKNGEQVLLFNSF 202
>SPBC36B7.02 |||Svf1 family protein Svf2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 353
Score = 25.8 bits (54), Expect = 6.5
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +2
Query: 374 FRNFGHRWHGAVCFDARSVYKKWSRLCSSIFINKPPNVSRHQTN 505
F N GH W ++ FD KK C F P R Q +
Sbjct: 188 FTNLGHTWQNSILFDKS---KKSILTCLHYFPRDPSQPFRSQAS 228
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 25.8 bits (54), Expect = 6.5
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Frame = +2
Query: 425 SVYKKWSRLCSSIFINKPPNVSRHQTNEELITRVK-GSERVPILL---VGNKADLEHQRE 592
S +KK + SS +NK + +T+EE + V +E V +L+ V K + EH+
Sbjct: 54 SSWKKAISIFSSPVVNKHEDSFDSKTDEEYLQNVSTTTEDVSMLINTPVTEKYEQEHRDT 113
Query: 593 VAHAEGAALAQMWGCPFVE-ASAKSRTNVNEMFAE-IVREMNVS 718
A A + + Q S K +T +NE+ E I+ +N S
Sbjct: 114 SAQATPSIVEQSPNQMLANFFSKKGKTPLNEIEKEGIISILNKS 157
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 25.8 bits (54), Expect = 6.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 542 VPILLVGNKADLEHQRE 592
VPIL+VGNK + H+ +
Sbjct: 534 VPILIVGNKTKVNHEND 550
>SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -2
Query: 492 LETFGGLLMNILLQSLDH-FLYTDLASK 412
LETFGG L++S+ H F Y+ + +K
Sbjct: 132 LETFGGRFSKGLMKSMTHLFTYSGMGAK 159
>SPAC212.04c |||S. pombe specific DUF999 family protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 288
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +1
Query: 328 RISTEKKSKWTILLVF 375
RIST+ KS+W +L+++
Sbjct: 98 RISTQDKSRWVLLIIW 113
>SPAC6F6.08c |cdc16|bub2|two-component GAP Cdc16|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 299
Score = 25.4 bits (53), Expect = 8.6
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 480 GGLLMNILLQSLDHFLYTDLASK-QTAPCQRCPKFL 376
G L++ L+ LDH LYT L SK TA P L
Sbjct: 165 GAKLLDKCLEVLDHRLYTYLLSKGLTAKIYALPSIL 200
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,169,544
Number of Sequences: 5004
Number of extensions: 66306
Number of successful extensions: 228
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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