Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0151
         (745 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            59   1e-10
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    52   2e-08
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    26   1.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   2.5  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   5.7  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   7.5  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       23   7.5  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 59.3 bits (137), Expect = 1e-10
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = +3

Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDNSPCVLEILDTAGTEQFASM 419
           +G   VGKS+L ++FV G F E  + TI   F  + + +D++    EI DTAG E++ S+
Sbjct: 30  LGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQERYHSL 89

Query: 420 RDLYIKNGQGFVVVYSLTNHQTFQDIK 500
             +Y +  Q  +VVY + N  +F   K
Sbjct: 90  APMYYRGAQAAIVVYDIQNSDSFARAK 116



 Score = 44.0 bits (99), Expect = 5e-06
 Identities = 23/61 (37%), Positives = 34/61 (55%)
 Frame = +2

Query: 527 KGSERVPILLVGNKADLEHQREVAHAEGAALAQMWGCPFVEASAKSRTNVNEMFAEIVRE 706
           + S  + I L GNKADL + R V + E    A      F+E SAK+  NVN++F  I ++
Sbjct: 125 QASPNIVIALAGNKADLANSRVVDYEEAKQYADDNRLLFMETSAKTAVNVNDIFLAIAKK 184

Query: 707 M 709
           +
Sbjct: 185 L 185


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 51.6 bits (118), Expect = 2e-08
 Identities = 26/85 (30%), Positives = 44/85 (51%)
 Frame = +3

Query: 243 VGFGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMR 422
           VG G VGK+ + + + +  F  +Y PT  D Y   + VD     L + DTAG E +  +R
Sbjct: 12  VGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQEDYDRLR 71

Query: 423 DLYIKNGQGFVVVYSLTNHQTFQDI 497
            L       F++ YS+ +  +F+++
Sbjct: 72  PLSYPQTDVFLICYSVASPSSFENV 96



 Score = 24.6 bits (51), Expect = 3.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 545 PILLVGNKADLEHQRE 592
           PI+LVG K DL   RE
Sbjct: 112 PIILVGTKIDLREDRE 127


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +3

Query: 441 GQGFVVVYSLTNHQTFQDIKPMKN*L---LVSKDQNVYQFYLWE 563
           G  F ++YS+ N+    D+  + N +   LVS     Y ++ WE
Sbjct: 281 GGSFSIIYSMINNDGRMDVVDLINGILASLVSVTAGCYLYHAWE 324


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 178 CYRNVFTLCAIKCHC 134
           C RN  T+C  KC+C
Sbjct: 803 CKRNGLTICIEKCYC 817


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 274 NALFPTPPNPTRPL 233
           NA+ PTPP   RP+
Sbjct: 632 NAIVPTPPTTRRPI 645


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 411 ASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKN*LLVSKD 533
           A  R      G+  + V    NH+ F+ + P  N + +S+D
Sbjct: 253 AEKRSKLDPKGKKLIFVGYADNHKAFRFVDPTSNKITLSRD 293


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 411 ASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKN*LLVSKD 533
           A  R      G+  + V    NH+ F+ + P  N + +S+D
Sbjct: 23  AEKRSKLDPKGKKLIFVGYADNHKAFRFVDPTSNKITLSRD 63


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,144
Number of Sequences: 2352
Number of extensions: 16704
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)