Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0151
         (745 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   4.0  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   4.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   7.0  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   9.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   9.2  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   9.2  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +2

Query: 644 VEASAKSRTNVNEMFAEIVREMNVSPEKEKP 736
           V+   K+ + +++   + + E+N   E EKP
Sbjct: 29  VQEICKTESGIDQQTVDDINEVNFDVEDEKP 59


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +2

Query: 644 VEASAKSRTNVNEMFAEIVREMNVSPEKEKP 736
           V+   K+ + +++   + + E+N   E EKP
Sbjct: 29  VQEICKAESGIDQQTVDDINEVNFDVEDEKP 59


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = +1

Query: 109  SE*VINQHSNDIL*RTV*IRFYNIVWKTRNCDLRSTIMREFKVVVLGSGG 258
            +E V  Q  +D    T+  +   I W +      + ++  +KV+V+ SGG
Sbjct: 1077 AEGVPEQPPHDTTCTTLTSQTIRISWMSPPLSAANGVITGYKVIVIPSGG 1126


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 300 FMEKYDPTIEDFYRKEIEVDNSP 368
           F + +DP IED++    + D  P
Sbjct: 61  FADLFDPIIEDYHGGFKKTDKHP 83


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 478 TKRFKTSNQ*RIDYSCQRIRTCTNS 552
           TK  K + +   DY CQ  +   NS
Sbjct: 608 TKDIKQNEEITFDYMCQSSKNSENS 632


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 300 FMEKYDPTIEDFYRKEIEVDNSP 368
           F + +DP IED++    + D  P
Sbjct: 77  FADLFDPIIEDYHGGFKKTDKHP 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,002
Number of Sequences: 438
Number of extensions: 4293
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)