Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0149
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28943-4|AAA68358.1|  298|Caenorhabditis elegans Hypothetical pr...    80   2e-15
AF078157-10|AAG24074.1|  377|Caenorhabditis elegans Hypothetical...    33   0.25 
Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AF125964-3|ABA03110.1|  805|Caenorhabditis elegans Hypothetical ...    30   1.7  
AF047655-2|ABD63245.1|  805|Caenorhabditis elegans Hypothetical ...    30   1.7  
AF025465-10|AAB71023.1|  805|Caenorhabditis elegans Hypothetical...    30   1.7  
AF016422-2|AAG24174.1|  805|Caenorhabditis elegans Hypothetical ...    30   1.7  
AC024831-3|ABD63213.1|  805|Caenorhabditis elegans Hypothetical ...    30   1.7  
U40797-6|AAB37547.1|  235|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AF077531-1|AAC64610.1|  374|Caenorhabditis elegans Hypothetical ...    29   4.0  
AC006624-8|AAF39782.2| 1092|Caenorhabditis elegans Importin beta...    29   4.0  
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p...    28   5.3  
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep...    28   5.3  
AC024761-8|AAF59469.2|  335|Caenorhabditis elegans Hypothetical ...    28   5.3  
Z83125-1|CAB05620.2|  420|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U97192-2|AAO38678.1|  622|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U97192-1|AAB52434.2|  986|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U41014-1|AAK32947.3|  641|Caenorhabditis elegans Hypothetical pr...    27   9.3  
AY037795-1|AAK94760.1|  420|Caenorhabditis elegans GLY-16 protein.     27   9.3  
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ...    27   9.3  

>U28943-4|AAA68358.1|  298|Caenorhabditis elegans Hypothetical
           protein E04F6.3 protein.
          Length = 298

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 36/57 (63%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
 Frame = +1

Query: 508 SLYRM-SGDLNPLHIDPNVATASGHKKPILHGLASLGFSARHVLAKFGGNDSSNVKA 675
           +LYR+ SGD+NPLH+DP  A  SG K PILHGL SLGF+ RHV+A + GNDS   KA
Sbjct: 178 ALYRLGSGDMNPLHVDPEFAKMSGFKTPILHGLCSLGFATRHVIAAWAGNDSDKFKA 234



 Score = 67.7 bits (158), Expect = 7e-12
 Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = +2

Query: 260 EGVFTTRCYVVDILDKGSSAVAIVNSEIF-QNKQLVCRTQQHIFVLGQGGFGGPRNSKNA 436
           EG   +   VVDILDKGS A+ + N   + +N + +   Q   F  G G FGG R S + 
Sbjct: 94  EGKLKSEARVVDILDKGSGALILGNVTTYDENGKKIAMQQFSTFQTGSGNFGGDRTSPHE 153

Query: 437 IGVGNAPKRNPDAVVEQRTAEDQA 508
           I     P R PDAV+EQ+T  DQA
Sbjct: 154 IKAATVPDRAPDAVIEQKTTVDQA 177



 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 34/77 (44%), Positives = 48/77 (62%)
 Frame = +3

Query: 6   YDYNAKDLVIYALGVGASVENPTDLKFLYESHENFSPLPSFFILAGMCMEAPIVANAMPP 185
           + Y+ +D +IYALGVGA  +   DL ++YE+HE+F  LPS+ +  G   +A  + +   P
Sbjct: 16  FSYSTRDAIIYALGVGARAKE--DLCYVYENHEDFKVLPSYIVAPG--FQAHTLMDW--P 69

Query: 186 GKFADFTNVLHGEQYIE 236
           G   D   VLHGEQYIE
Sbjct: 70  GVEFDLQRVLHGEQYIE 86


>AF078157-10|AAG24074.1|  377|Caenorhabditis elegans Hypothetical
           protein F25E5.3 protein.
          Length = 377

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -3

Query: 600 SMENRLLVSTCGRNVGINMQRIEVTRHSVERAWSSAV 490
           S EN+ L +TCGRN    M+ ++  R S+E  W+ +V
Sbjct: 30  STENKQLQATCGRNTRYQMKTLDGER-SIESPWAGSV 65


>Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical
           protein K02B7.1 protein.
          Length = 742

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 529 HQTFCRESLVFGGALFHDGIRISLRCVSDAD 437
           +Q FC    VF   ++HDGIR S  C    D
Sbjct: 597 YQQFCETGDVFLNVVYHDGIRYSNYCNKKTD 627


>AF125964-3|ABA03110.1|  805|Caenorhabditis elegans Hypothetical
           protein W03G1.4 protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 529 HQTFCRESLVFGGALFHDGIRISLRCVSDAD 437
           +Q FC    VF   ++HDGIR S  C    D
Sbjct: 660 YQQFCETGDVFLNVVYHDGIRYSNYCNKKTD 690


>AF047655-2|ABD63245.1|  805|Caenorhabditis elegans Hypothetical
           protein C17B7.7 protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 529 HQTFCRESLVFGGALFHDGIRISLRCVSDAD 437
           +Q FC    VF   ++HDGIR S  C    D
Sbjct: 660 YQQFCETGDVFLNVVYHDGIRYSNYCNKKTD 690


>AF025465-10|AAB71023.1|  805|Caenorhabditis elegans Hypothetical
           protein K02E7.3 protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 529 HQTFCRESLVFGGALFHDGIRISLRCVSDAD 437
           +Q FC    VF   ++HDGIR S  C    D
Sbjct: 660 YQQFCETGDVFLNVVYHDGIRYSNYCNKKTD 690


>AF016422-2|AAG24174.1|  805|Caenorhabditis elegans Hypothetical
           protein R09E12.6 protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 529 HQTFCRESLVFGGALFHDGIRISLRCVSDAD 437
           +Q FC    VF   ++HDGIR S  C    D
Sbjct: 660 YQQFCETGDVFLNVVYHDGIRYSNYCNKKTD 690


>AC024831-3|ABD63213.1|  805|Caenorhabditis elegans Hypothetical
           protein Y55F3C.6 protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 529 HQTFCRESLVFGGALFHDGIRISLRCVSDAD 437
           +Q FC    VF   ++HDGIR S  C    D
Sbjct: 660 YQQFCETGDVFLNVVYHDGIRYSNYCNKKTD 690


>U40797-6|AAB37547.1|  235|Caenorhabditis elegans Hypothetical
           protein C28C12.4 protein.
          Length = 235

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 392 LGQGGFGGPRNSKNAIGVGNAPKRNPDAVVEQRTAED 502
           +G+GGFGG        G+G   +  PD++ E     D
Sbjct: 198 MGRGGFGGQGMGGMGAGLGQGRRGGPDSMNESSDVND 234


>AF077531-1|AAC64610.1|  374|Caenorhabditis elegans Hypothetical
           protein F13C5.2 protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query: 395 GQGGFGGPRNSKNAI-GVGNAPKRNPDAVVEQRTAEDQALS 514
           G+GG G PR SKN+  G G  P +       +  +ED+A S
Sbjct: 72  GRGGRGRPRGSKNSDGGAGGPPAKRGRKKKAKSESEDEAES 112


>AC006624-8|AAF39782.2| 1092|Caenorhabditis elegans Importin beta
           family protein 3 protein.
          Length = 1092

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/61 (24%), Positives = 30/61 (49%)
 Frame = -1

Query: 260 RCREVTDEFNVLLSVKHISEISEFARRHGVSNDRGLHAHSSQYEERG*GREILVALVKEL 81
           R      +FN+  + + + E  E    HG+  ++ +   +S  EE+    ++LVA  KE+
Sbjct: 624 RAARYRPDFNIFNN-EDVHENEEGVEYHGIGGEKTVGIRTSGLEEKATACDMLVAFAKEM 682

Query: 80  Q 78
           +
Sbjct: 683 K 683


>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
            protein 68 protein.
          Length = 5079

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 158  GLHAHSSQYEERG*GREILVALVKELQIGRVLDRSSHSQ 42
            GLH  S         +E ++ LV +LQI  VLD  S S+
Sbjct: 1721 GLHLMSHTAARNSMAKEYVIPLVPQLQIKNVLDPDSESR 1759


>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
            protein.
          Length = 5071

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 158  GLHAHSSQYEERG*GREILVALVKELQIGRVLDRSSHSQ 42
            GLH  S         +E ++ LV +LQI  VLD  S S+
Sbjct: 1842 GLHLMSHTAARNSMAKEYVIPLVPQLQIKNVLDPDSESR 1880


>AC024761-8|AAF59469.2|  335|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.3 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 35  LRPGSGSFGREPDRFEVPLREPREFLSLTLVLHT-GWNVH 151
           L+ G G  G+EP     PL E  +  S  LV++T  W+ H
Sbjct: 109 LKIGDGDAGQEPSSAITPLNELLQLSSWDLVVYTKDWHPH 148


>Z83125-1|CAB05620.2|  420|Caenorhabditis elegans Hypothetical
           protein T15D6.2 protein.
          Length = 420

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -3

Query: 549 NMQRIEV--TRHSVERAWSSAVRCSTTASGFRFGAFP 445
           N +++E+  T+   ++ W+S  RC T  S FRF   P
Sbjct: 53  NEKQLELINTKMIEDKLWNSTDRCHTVKSMFRFNEVP 89


>U97192-2|AAO38678.1|  622|Caenorhabditis elegans Hypothetical
           protein C01F4.2b protein.
          Length = 622

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +3

Query: 69  PTDLKFLYESHENFSPLPSFFILAGMCMEAPIVANAMPPGKFADFTNVLHGE 224
           P D K+LY S +N  P  +    +     +PI+ +A P G      N+L  E
Sbjct: 439 PEDRKWLYPSTQNLYPTST----SNPSSPSPIMGSAPPTGSILPSANLLSAE 486


>U97192-1|AAB52434.2|  986|Caenorhabditis elegans Hypothetical
           protein C01F4.2a protein.
          Length = 986

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +3

Query: 69  PTDLKFLYESHENFSPLPSFFILAGMCMEAPIVANAMPPGKFADFTNVLHGE 224
           P D K+LY S +N  P  +    +     +PI+ +A P G      N+L  E
Sbjct: 439 PEDRKWLYPSTQNLYPTST----SNPSSPSPIMGSAPPTGSILPSANLLSAE 486


>U41014-1|AAK32947.3|  641|Caenorhabditis elegans Hypothetical
           protein C06G1.4 protein.
          Length = 641

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 395 GQGGFGGPRNSKNAIGVGNA 454
           GQGG GG RN  N  G+G++
Sbjct: 289 GQGGHGGQRNYNNRGGMGHS 308


>AY037795-1|AAK94760.1|  420|Caenorhabditis elegans GLY-16 protein.
          Length = 420

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -3

Query: 549 NMQRIEV--TRHSVERAWSSAVRCSTTASGFRFGAFP 445
           N +++E+  T+   ++ W+S  RC T  S FRF   P
Sbjct: 53  NEKQLELINTKMIEDKLWNSTDRCHTVKSMFRFNEVP 89


>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
           protein Y8A9A.2 protein.
          Length = 1360

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = +2

Query: 485 QRTAEDQALSTECLVTSILCILIPTLRPQVDTRSRFSMDSHPLVFQLDMF*LNLVETTPA 664
           + T E  + ST+   TS+  + +  L+P +      S+ +HPL         N + + PA
Sbjct: 268 ESTTESTSTSTDSTTTSLPALPLILLQPSLPQNQLRSLPAHPLNLLQPSLPQNQLRSLPA 327

Query: 665 M 667
           +
Sbjct: 328 L 328


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,441,706
Number of Sequences: 27780
Number of extensions: 415590
Number of successful extensions: 1263
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)